RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 FEZF2Q8TBJ5 459 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 ZNF669Q96BR6 464 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 USP27XA6NNY8 438 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 WBP4O75554 376 aaKnown RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 GPC1P35052 558 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 PRIM2P49643 509 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 KPNA1P52294 538 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 GUCY1A3Q02108 690 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 ACTN3Q08043 901 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 CTXN3Q4LDR2 81 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 SBK1Q52WX2 424 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 MIB1Q86YT6 1006 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 DDI1Q8WTU0 396 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 USP13Q92995 863 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 CYB561D2O14569 222 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 HNRNPRO43390 633 aaKnown RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 SLC2A3P11169 496 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 ATG9AQ7Z3C6 839 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 GALNT4Q8N4A0 578 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 ASCC2Q9H1I8 757 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 KCTD10Q9H3F6 313 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 RASSF10A6NK89 507 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 PSMA3P25788 255 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 PLIN5Q00G26 463 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 PLOD1Q02809 727 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 MTF1Q14872 753 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 TRIP4Q15650 581 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 NT5DC4Q86YG4 428 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 MIER2Q8N344 545 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 CCDC33Q8N5R6 958 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 SPATA4Q8NEY3 305 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 TARS2Q9BW92 718 aaKnown RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 RANBP17Q9H2T7 1088 aaKnown RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 OSGEPL1Q9H4B0 414 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 EXOSC4Q9NPD3 245 aaKnown RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 UBQLN1Q9UMX0 589 aaKnown RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 C16orf96A6NNT2 1141 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 CST8O60676 142 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 ANXA9O76027 345 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 CKMP06732 381 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 C9orf72Q96LT7 481 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 SHCBP1LQ9BZQ2 653 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 DYRK1BQ9Y463 629 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 MRFAP1Q9Y605 127 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 PRDM15P57071 1507 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 CFAP73A6NFT4 308 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 PCDH8O95206 1070 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 SERPINB4P48594 390 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 GEMP55040 296 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 MAP3K7CLP57077 242 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 TRIM69Q86WT6 500 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 IFNLR1Q8IU57 520 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-201ENST00000225964 EIF3LQ9Y262 564 aaKnown RBP13.75□□□□□ -0.21
COL1A1-201ENST00000225964 GOLGA8TH3BQL2 631 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 HPGDP15428 266 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 RAP1GAPP47736 663 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 MRPS15P82914 257 aaKnown RBP13.75□□□□□ -0.21
COL1A1-201ENST00000225964 GALNTL6Q49A17 601 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 TRAPPC11Q7Z392 1133 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 PCDHB12Q9Y5F1 795 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 ZBTB39O15060 712 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 HOXA2O43364 376 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 B3GAT3O94766 335 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 COMTP21964 271 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 KLK7P49862 253 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 OXCT1P55809 520 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 RPS6P62753 249 aaKnown RBP13.75□□□□□ -0.21
COL1A1-201ENST00000225964 DPYDQ12882 1025 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 GJB7Q6PEY0 223 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 OTOAQ7RTW8 1153 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 METTL16Q86W50 562 aaKnown RBP13.75□□□□□ -0.21
COL1A1-201ENST00000225964 FBXO16Q8IX29 292 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-201ENST00000225964 ADGRF2Q8IZF7 708 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 KIRREL3Q8IZU9 778 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 NBPF15Q8N660 670 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 ARRDC4Q8NCT1 418 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 KAT2BQ92831 832 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 CMTM5Q96DZ9 223 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 JMJD4Q9H9V9 463 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 AGTP01019 485 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 ZNF284Q2VY69 593 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 NBPF9Q3BBW0 867 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 MROH9Q5TGP6 573 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 EMILIN2Q9BXX0 1053 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 NMRK1Q9NWW6 199 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 TBX20Q9UMR3 447 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 COPG1Q9Y678 874 aaKnown RBP13.75□□□□□ -0.21
COL1A1-201ENST00000225964 ALKQ9UM73 1620 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 CHI3L2Q15782 390 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 CCDC144BQ3MJ40 725 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 C9orf131Q5VYM1 1079 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 CCDC60Q8IWA6 550 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-201ENST00000225964 RIN3Q8TB24 985 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 EME1Q96AY2 570 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 CCDC3Q9BQI4 270 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 OSBPL8Q9BZF1 889 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 CCSER1Q9C0I3 900 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 STARD7Q9NQZ5 370 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 PDS5AQ29RF7 1337 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms