RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 TAS1R2Q8TE23 839 aa10.93□□□□□ -0.66
PHGDH-224ENST00000641711 EPS8L1Q8TE68 723 aa10.93□□□□□ -0.66
PHGDH-224ENST00000641711 CTNNBL1Q8WYA6 563 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-224ENST00000641711 TAF4BQ92750 862 aa10.93□□□□□ -0.66
PHGDH-224ENST00000641711 KIF12Q96FN5 646 aa10.93□□□□□ -0.66
PHGDH-224ENST00000641711 TMEM169Q96HH4 297 aa10.93□□□□□ -0.66
PHGDH-224ENST00000641711 LRCH3Q96II8 777 aa10.93□□□□□ -0.66
PHGDH-224ENST00000641711 ARID3AQ99856 593 aa10.93□□□□□ -0.66
PHGDH-224ENST00000641711 COLEC11Q9BWP8 271 aa10.93□□□□□ -0.66
PHGDH-224ENST00000641711 KLK14Q9P0G3 267 aa10.93□□□□□ -0.66
PHGDH-224ENST00000641711 TMEM59LQ9UK28 342 aa10.93□□□□□ -0.66
PHGDH-224ENST00000641711 NOCTQ9UK39 431 aaKnown RBP10.93□□□□□ -0.66
PHGDH-224ENST00000641711 PRRC2BQ5JSZ5 2229 aaKnown RBP10.93□□□□□ -0.66
PHGDH-224ENST00000641711 BRWD1Q9NSI6 2320 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 ATG2AQ2TAZ0 1938 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 LACTBL1A8MY62 500 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 MTA2O94776 668 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 DDHD2O94830 711 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 ARHGEF15O94989 841 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 C4BPAP04003 597 aaKnown RBP10.92□□□□□ -0.66
PHGDH-224ENST00000641711 ALDH2P05091 517 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 CHRNB2P17787 502 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 CXCR5P32302 372 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 SLC11A1P49279 550 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 FAM193AP78312 1265 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 GABPB1Q06547 395 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-224ENST00000641711 ZACNQ401N2 412 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 ZBTB41Q5SVQ8 909 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 CCNI2Q6ZMN8 369 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-224ENST00000641711 NT5DC3Q86UY8 548 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 RHOT2Q8IXI1 618 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 SLC35G2Q8TBE7 412 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 KAT5Q92993 513 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 IGSF21Q96ID5 467 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 ANKRD36BP1Q96IX9 119 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 FNBP1Q96RU3 617 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 CGRRF1Q99675 332 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 C17orf80Q9BSJ5 609 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 TTYH1Q9H313 450 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-224ENST00000641711 VIPAS39Q9H9C1 493 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 MIOSQ9NXC5 875 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 FAN1Q9Y2M0 1017 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 SCN1AP35498 2009 aa10.92□□□□□ -0.66
PHGDH-224ENST00000641711 TRANK1O15050 2925 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 LAMA2P24043 3122 aaKnown RBP10.91□□□□□ -0.66
PHGDH-224ENST00000641711 SF3B1O75533 1304 aaKnown RBP eCLIP10.91□□□□□ -0.668e-6■■■■■ 107
PHGDH-224ENST00000641711 NRP1O14786 923 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 MEFVO15553 781 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-224ENST00000641711 TRAPPC3O43617 180 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 RTN2O75298 545 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 FGF18O76093 207 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 TMEM191BP0C7N4 346 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 PNPLA4P41247 253 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 AFF1P51825 1210 aaKnown RBP10.91□□□□□ -0.66
PHGDH-224ENST00000641711 CREMQ03060 361 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 GPM6BQ13491 265 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 GLIPR1L2Q4G1C9 344 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 TIGD5Q53EQ6 642 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 GLRA4Q5JXX5 417 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 JADE1Q6IE81 842 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 DCLRE1AQ6PJP8 1040 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 PEX26Q7Z412 305 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 DDX53Q86TM3 631 aaKnown RBP10.91□□□□□ -0.66
PHGDH-224ENST00000641711 NOP9Q86U38 636 aaKnown RBP10.91□□□□□ -0.66
PHGDH-224ENST00000641711 ZNF280BQ86YH2 543 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 RNF168Q8IYW5 571 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-224ENST00000641711 PPM1KQ8N3J5 372 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 RASGEF1CQ8N431 466 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 SLC20A1Q8WUM9 679 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 ARNTL2Q8WYA1 636 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 ZNF516Q92618 1163 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 PPP2R3CQ969Q6 453 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 HES6Q96HZ4 224 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 MS4A14Q96JA4 679 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 ZNF560Q96MR9 790 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 ZMAT2Q96NC0 199 aaKnown RBP10.91□□□□□ -0.66
PHGDH-224ENST00000641711 GAS2L1Q99501 681 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-224ENST00000641711 POP1Q99575 1024 aaKnown RBP10.91□□□□□ -0.66
PHGDH-224ENST00000641711 SELENOOQ9BVL4 669 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 HERC2P3Q9BVR0 1158 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 TAS2R14Q9NYV8 317 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 DNAJB4Q9UDY4 337 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 ADAM28Q9UKQ2 775 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 AMFRQ9UKV5 643 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 ITGA11Q9UKX5 1188 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 TTC7AQ9ULT0 858 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-224ENST00000641711 SSX2IPQ9Y2D8 614 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 VWA8A3KMH1 1905 aa10.91□□□□□ -0.66
PHGDH-224ENST00000641711 CHD7Q9P2D1 2997 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 PODXLO00592 558 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 CYP26A1O43174 497 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 BUB1BO60566 1050 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-224ENST00000641711 CLSTN1O94985 981 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 EFEMP2O95967 443 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 C1RP00736 705 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 TNNC2P02585 160 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 FTLP02792 175 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-224ENST00000641711 ITGB1P05556 798 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 NFICP08651 508 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 DLATP10515 647 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms