RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 RAD54LQ92698 747 aa17.04■□□□□ 0.32
CACNA1A-238ENST00000637276 SERAC1Q96JX3 654 aa17.04■□□□□ 0.32
CACNA1A-238ENST00000637276 MRPL1Q9BYD6 325 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-238ENST00000637276 AGO2Q9UKV8 859 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-238ENST00000637276 PPP2R3BQ9Y5P8 575 aa17.04■□□□□ 0.32
CACNA1A-238ENST00000637276 GMNCA6NCL1 334 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 MAPK11Q15759 364 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 PRDX5P30044 214 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 ACTR2P61160 394 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 RESTQ13127 1097 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 HAUS6Q7Z4H7 955 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 DPP10Q8N608 796 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 VPS37AQ8NEZ2 397 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 SENP6Q9GZR1 1112 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 SYBUQ9NX95 663 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 TIMM8BQ9Y5J9 83 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 LTFP02788 710 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 MROH9Q5TGP6 573 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 TRMT11Q7Z4G4 463 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 TADA1Q96BN2 335 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 CHST12Q9NRB3 414 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 FAM25EA8MYX2 175 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 FOXN1O15353 648 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 MAPKAPK2P49137 400 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 CNTN1Q12860 1018 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 PPP1R26Q5T8A7 1209 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 DENND6AQ8IWF6 608 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 CENPLQ8N0S6 344 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 ZSWIM2Q8NEG5 633 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 IL17RAQ96F46 866 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 SNF8Q96H20 258 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 TNKS2Q9H2K2 1166 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 SLC35C2Q9NQQ7 365 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 GID8Q9NWU2 228 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 AMACRQ9UHK6 382 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 NCKAP1LP55160 1127 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 RESP18Q5W5W9 173 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 ZNF772Q68DY9 489 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 SYNGAP1Q96PV0 1343 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 ZNF335Q9H4Z2 1342 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 KIAA0232Q92628 1395 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 A0A1W2PQ27 194 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 A0A1W2PQ64 194 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 A0A1W2PQD8 194 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 M0R3G1 203 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 KLHL38Q2WGJ6 581 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 ZNF618Q5T7W0 954 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 NLRP10Q86W26 655 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 PRPF18Q99633 342 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 TMEM117Q9H0C3 514 aa17.03■□□□□ 0.32
CACNA1A-238ENST00000637276 FAM107AO95990 144 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 PRKCBP05771 671 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 HLFQ16534 295 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 HIST2H2ACQ16777 129 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 HIST2H2AA3Q6FI13 130 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 HPS6Q86YV9 775 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 EXOC4Q96A65 974 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 METTL5Q9NRN9 209 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 UBP1Q9NZI7 540 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 C3orf70A6NLC5 250 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 OR6A2O95222 327 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 NUDT2P50583 147 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 NRG3P56975 720 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 OLFML2AQ68BL7 652 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 ZNF57Q68EA5 555 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 MARK2Q7KZI7 788 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 C16orf59Q7L2K0 433 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 ZNF786Q8N393 782 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 UBAP1Q9NZ09 502 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 ATP6V1B2P21281 511 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 RHOT2Q8IXI1 618 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 ADGRF4Q8IZF3 695 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 CYFIP2Q96F07 1278 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 BFARQ9NZS9 450 aa17.02■□□□□ 0.32
CACNA1A-238ENST00000637276 PRPF39Q86UA1 669 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-238ENST00000637276 PARGQ86W56 976 aa17.02■□□□□ 0.31
CACNA1A-238ENST00000637276 DDI1Q8WTU0 396 aa17.02■□□□□ 0.31
CACNA1A-238ENST00000637276 TBX22Q9Y458 520 aa17.02■□□□□ 0.31
CACNA1A-238ENST00000637276 RAPSNQ13702 412 aa17.02■□□□□ 0.31
CACNA1A-238ENST00000637276 POLR1BQ9H9Y6 1135 aa17.02■□□□□ 0.31
CACNA1A-238ENST00000637276 ZNF608Q9ULD9 1512 aaPredicted RBP17.02■□□□□ 0.31
CACNA1A-238ENST00000637276 ATP10DQ9P241 1426 aa17.02■□□□□ 0.31
CACNA1A-238ENST00000637276 NMT1P30419 496 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 MCAMP43121 646 aa17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 RAP1GAPP47736 663 aa17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 CYP39A1Q9NYL5 469 aa17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 CEP72Q9P209 647 aa17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 FBXO40Q9UH90 709 aa17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 DENND5BQ6ZUT9 1274 aa17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 TBC1D10CQ8IV04 446 aa17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 ATP6V1C2Q8NEY4 427 aa17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 TRIM62Q9BVG3 475 aa17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 ZBTB22O15209 634 aa17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 CLASP2O75122 1294 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 UTP15Q8TED0 518 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 PQBP1O60828 265 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-238ENST00000637276 SRP54P61011 504 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms