RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 SETD3Q86TU7 594 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 NOA1Q8NC60 698 aaKnown RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 PI4K2AQ9BTU6 479 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 GPR63Q9BZJ6 419 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 NDEL1Q9GZM8 345 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 PDP2Q9P2J9 529 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 AP4S1Q9Y587 144 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 CCNI2Q6ZMN8 369 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 DPF2Q92785 391 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 CCSER1Q9C0I3 900 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 A2ML1A8K2U0 1454 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 TRAPPC3O43617 180 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 CYBBP04839 570 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 GEMIN4P57678 1058 aaKnown RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 ARHGEF7Q14155 803 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 ZIM3Q96PE6 472 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 FOXP3Q9BZS1 431 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 TRIM49D1C9J1S8 452 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 HSPA13P48723 471 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 ARL4DP49703 201 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 PSMD7P51665 324 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 HMGCS2P54868 508 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 ALDH6A1Q02252 535 aaKnown RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 SOX13Q9UN79 622 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 LINC00854A0A1B0GVQ3 168 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 MLNP12872 115 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 VHLP40337 213 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 TMEM62Q0P6H9 643 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 SGMS1Q86VZ5 419 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 TFB1MQ8WVM0 346 aaKnown RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 TUBGCP3Q96CW5 907 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 PDLIM2Q96JY6 352 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 RSAD1Q9HA92 442 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 ALDH1A1P00352 501 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 IRF1P10914 325 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 KCNJ1P48048 391 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 PTK6Q13882 451 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 PTGISQ16647 500 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 ZRANB3Q5FWF4 1079 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 LRRC8DQ7L1W4 858 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 LDHDQ86WU2 507 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 ZNF669Q96BR6 464 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 ECSITQ9BQ95 431 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 GOLGA8TH3BQL2 631 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 GYPCP04921 128 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 HSD17B3P37058 310 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 STAT5BP51692 787 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 SGSM1Q2NKQ1 1148 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 CFAP99D6REC4 459 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 TPST1O60507 370 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 RASSF9O75901 435 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 TIPINQ9BVW5 301 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 KDM6AO15550 1401 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 SOX6P35712 828 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 KPNB1Q14974 876 aaKnown RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 MAPRE1Q15691 268 aaKnown RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 TADA1Q96BN2 335 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 CATSPERBQ9H7T0 1116 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 CD209Q9NNX6 404 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 RIC8BQ9NVN3 520 aa9.48□□□□□ -0.89
CSMD1-218ENST00000635120 PDS5AQ29RF7 1337 aaKnown RBP9.48□□□□□ -0.89
CSMD1-218ENST00000635120 MYMKA6NI61 221 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 TNPO2O14787 897 aaKnown RBP9.47□□□□□ -0.89
CSMD1-218ENST00000635120 HSMCR30P0CW71 290 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 C10orf53Q8N6V4 93 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 GLMNQ92990 594 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 MTERF3Q96E29 417 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 CAAP1Q9H8G2 361 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 CAPN10Q9HC96 672 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 LSM7Q9UK45 103 aaKnown RBP9.47□□□□□ -0.89
CSMD1-218ENST00000635120 KCNJ6P48051 423 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 NME5P56597 212 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 PLA2G4FQ68DD2 849 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 GPAT2Q6NUI2 795 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 NUDT18Q6ZVK8 323 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 PPIL6Q8IXY8 311 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 E2F7Q96AV8 911 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 PSMD14O00487 310 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 SEC24CP53992 1094 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 DNAJC3Q13217 504 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 EPC2Q52LR7 807 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 TRIM65Q6PJ69 517 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 STOX1Q6ZVD7 989 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 EPS8L3Q8TE67 593 aaKnown RBP9.47□□□□□ -0.89
CSMD1-218ENST00000635120 ERP44Q9BS26 406 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 NOD2Q9HC29 1040 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 ABCC3O15438 1527 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 SSU72P8A0A1W2PR75 194 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 DGAT1O75907 488 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 PTPN7P35236 360 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 NT5C1AQ9BXI3 368 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 KIAA0391O15091 583 aaKnown RBP9.47□□□□□ -0.89
CSMD1-218ENST00000635120 TADA2AO75478 443 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 FXR1P51114 621 aaKnown RBP eCLIP9.47□□□□□ -0.89
CSMD1-218ENST00000635120 DENND5BQ6ZUT9 1274 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 TRAPPC11Q7Z392 1133 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 FAM111AQ96PZ2 611 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 DEPDC7Q96QD5 511 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms