RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 PGM1P36871 562 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 LBRQ14739 615 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 MGAT5BQ3V5L5 792 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 ELMO3Q96BJ8 720 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 SEC16BQ96JE7 1060 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 PABPC3Q9H361 631 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 KLC4Q9NSK0 619 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 ZC3H4Q9UPT8 1303 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 SNRPAP09012 282 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 KRT4P19013 534 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 MYL6P60660 151 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 KCNA1Q09470 495 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 NT5DC1Q5TFE4 455 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 WDR93Q6P2C0 686 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 APLFQ8IW19 511 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 IPMKQ8NFU5 416 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 MMTAG2Q9BU76 263 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 DNAJC6O75061 913 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 KCNA2P16389 499 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 PRLRP16471 622 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 PLA2G4AP47712 749 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 DACT2Q5SW24 774 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 MPZL3Q6UWV2 235 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 DACT3Q96B18 629 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 TRPC7Q9HCX4 862 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 DDIT4Q9NX09 232 aa13.06□□□□□ -0.32
TNFAIP3-206ENST00000612899 EML1O00423 815 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 CYP24A1Q07973 514 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 TMED1Q13445 227 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 MROH9Q5TGP6 573 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 OTOP1Q7RTM1 612 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 ST13P4Q8IZP2 240 aaPredicted RBP13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 EFHBQ8N7U6 833 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 TMC2Q8TDI7 906 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 ZNF669Q96BR6 464 aaPredicted RBP13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 TRIM15Q9C019 465 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 CAND2O75155 1236 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 H2AFXP16104 143 aaPredicted RBP13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 CTCFP49711 727 aaPredicted RBP13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 MMP14P50281 582 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 UGP2Q16851 508 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 ANO4Q32M45 955 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 IL31Q6EBC2 164 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 LVRNQ6Q4G3 990 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 PPIL6Q8IXY8 311 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 EMC1Q8N766 993 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 TATDN2Q93075 761 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 C20orf96Q9NUD7 363 aaPredicted RBP13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 NDE1Q9NXR1 346 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 LRRIQ3A6PVS8 624 aaPredicted RBP13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 ESRRBO95718 433 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 AP2B1P63010 937 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 PGM5Q15124 567 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 FBXW10Q5XX13 1052 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 CCDC33Q8N5R6 958 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 DTX3LQ8TDB6 740 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 TASP1Q9H6P5 420 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 SLC13A4Q9UKG4 626 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 PPLO60437 1756 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 M0QYT0 321 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 HNRNPCP07910 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 SLURP2P0DP57 97 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 SERPINB9P50453 376 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 DNAJC3Q13217 504 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 SLC25A41Q8N5S1 370 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 SLC35C1Q96A29 364 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 XAB2Q9HCS7 855 aaKnown RBP13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 CISHQ9NSE2 258 aa13.05□□□□□ -0.32
TNFAIP3-206ENST00000612899 A0A087WZ62 844 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 POLBP06746 335 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 SPRP35270 261 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 CGRRF1Q99675 332 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 FDXACB1Q9BRP7 624 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 IDI2Q9BXS1 227 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 KIAA1683Q9H0B3 1180 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 RMI1Q9H9A7 625 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 ARHGEF38Q9NXL2 777 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 TRAF3IP3Q9Y228 551 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 TLR2O60603 784 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 ZC3H11AO75152 810 aaKnown RBP eCLIP13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 TFRCP02786 760 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 STAG3L1P0CL83 205 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 YY1P25490 414 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 HNRNPH1P31943 449 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 STIP1P31948 543 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 PTGER2P43116 358 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 PAN2Q504Q3 1202 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 TRIM54Q9BYV2 358 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 GTPBP10A4D1E9 387 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 SPAG6O75602 509 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 LAMB3Q13751 1172 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 TTC23LQ6PF05 361 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 TRPM8Q7Z2W7 1104 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 ZNF507Q8TCN5 953 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 SPATC1LQ9H0A9 340 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 GPATCH2LQ9NWQ4 482 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 ABI2Q9NYB9 513 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms