RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 SYAP1Q96A49 352 aaPredicted RBP20.66■□□□□ 0.9
TCF3-219ENST00000610756 LPIN3Q9BQK8 851 aa20.66■□□□□ 0.9
TCF3-219ENST00000610756 PI4K2AQ9BTU6 479 aa20.66■□□□□ 0.9
TCF3-219ENST00000610756 PLA2G2FQ9BZM2 168 aa20.66■□□□□ 0.9
TCF3-219ENST00000610756 ZNF334Q9HCZ1 680 aaPredicted RBP20.66■□□□□ 0.9
TCF3-219ENST00000610756 A0A1W2PRU2 124 aa20.65■□□□□ 0.9
TCF3-219ENST00000610756 MYBPHLA2RUH7 354 aa20.65■□□□□ 0.9
TCF3-219ENST00000610756 FCARP24071 287 aa20.65■□□□□ 0.9
TCF3-219ENST00000610756 GNL1P36915 607 aaPredicted RBP20.65■□□□□ 0.9
TCF3-219ENST00000610756 MCCD1P59942 119 aaPredicted RBP20.65■□□□□ 0.9
TCF3-219ENST00000610756 ENPEPQ07075 957 aa20.65■□□□□ 0.9
TCF3-219ENST00000610756 ADAM9Q13443 819 aa20.65■□□□□ 0.9
TCF3-219ENST00000610756 CFAP221Q4G0U5 840 aa20.65■□□□□ 0.9
TCF3-219ENST00000610756 ZCWPW2Q504Y3 356 aa20.65■□□□□ 0.9
TCF3-219ENST00000610756 COBLL1Q53SF7 1204 aa20.65■□□□□ 0.9
TCF3-219ENST00000610756 FUBP3Q96I24 572 aaKnown RBP eCLIP20.65■□□□□ 0.9
TCF3-219ENST00000610756 GTPBP4Q9BZE4 634 aaKnown RBP20.65■□□□□ 0.9
TCF3-219ENST00000610756 PCDHA5Q9Y5H7 936 aa20.65■□□□□ 0.9
TCF3-219ENST00000610756 ZNF318Q5VUA4 2279 aa20.65■□□□□ 0.9
TCF3-219ENST00000610756 TSC2P49815 1807 aa20.65■□□□□ 0.9
TCF3-219ENST00000610756 HCRTO43612 131 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 ATP2C2O75185 946 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 AKAP3O75969 853 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 PDGFRBP09619 1106 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 CYP2F1P24903 491 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 PSMC2P35998 433 aaKnown RBP20.64■□□□□ 0.89
TCF3-219ENST00000610756 RPL10AP62906 217 aaKnown RBP20.64■□□□□ 0.89
TCF3-219ENST00000610756 TNNC1P63316 161 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 PFKPQ01813 784 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 BIRC3Q13489 604 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 NCOA4Q13772 614 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 MAPRE1Q15691 268 aaKnown RBP20.64■□□□□ 0.89
TCF3-219ENST00000610756 TAF12Q16514 161 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 EDRF1Q3B7T1 1238 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 ZACNQ401N2 412 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 ZNF658Q5TYW1 1059 aaPredicted RBP20.64■□□□□ 0.89
TCF3-219ENST00000610756 PHLDB3Q6NSJ2 640 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 INTS8Q75QN2 995 aaKnown RBP20.64■□□□□ 0.89
TCF3-219ENST00000610756 SPATA2LQ8IUW3 424 aaPredicted RBP20.64■□□□□ 0.89
TCF3-219ENST00000610756 FLCNQ8NFG4 579 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 ZSCAN18Q8TBC5 510 aaPredicted RBP20.64■□□□□ 0.89
TCF3-219ENST00000610756 GIPC2Q8TF65 315 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 E2F7Q96AV8 911 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 SYT15Q9BQS2 421 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 MRPL45Q9BRJ2 306 aaKnown RBP20.64■□□□□ 0.89
TCF3-219ENST00000610756 ATXN3LQ9H3M9 355 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 CA14Q9ULX7 337 aa20.64■□□□□ 0.89
TCF3-219ENST00000610756 VNN1O95497 513 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 HMGA1P17096 107 aaKnown RBP20.63■□□□□ 0.89
TCF3-219ENST00000610756 AOC1P19801 751 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 GABRR2P28476 465 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 PLA2G5P39877 138 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 PRCPP42785 496 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 VAMP7P51809 220 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 SGSM1Q2NKQ1 1148 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 C1orf220Q5T0J3 134 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 CWF19L1Q69YN2 538 aaKnown RBP20.63■□□□□ 0.89
TCF3-219ENST00000610756 C4orf50Q6ZRC1 276 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 SV2AQ7L0J3 742 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 SMYD4Q8IYR2 804 aaPredicted RBP20.63■□□□□ 0.89
TCF3-219ENST00000610756 TMEM105Q8N8V8 129 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 SMARCE1Q969G3 411 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 FAM122AQ96E09 287 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 SHDQ96IW2 340 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 SNX25Q9H3E2 840 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 IL21Q9HBE4 155 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 CRTAC1Q9NQ79 661 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 ARHGEF3Q9NR81 526 aa20.63■□□□□ 0.89
TCF3-219ENST00000610756 NXF1Q9UBU9 619 aaKnown RBP20.63■□□□□ 0.89
TCF3-219ENST00000610756 CSH1P0DML2 217 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 CSH2P0DML3 217 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 WEE1P30291 646 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 CDC25CP30307 473 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 MAGEA11P43364 429 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 STARD6P59095 220 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 DDR2Q16832 855 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 SLC44A4Q53GD3 710 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 OR6B3Q8NGW1 331 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 MYCBPAPQ8TBZ2 947 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 TAF4BQ92750 862 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 MKNK1Q9BUB5 465 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 SLITRK6Q9H5Y7 841 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 MAGEC2Q9UBF1 373 aaPredicted RBP20.62■□□□□ 0.89
TCF3-219ENST00000610756 MUC6Q6W4X9 2439 aa20.62■□□□□ 0.89
TCF3-219ENST00000610756 STK25O00506 426 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 PI15O43692 258 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 PSMC3P17980 439 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 VIPR2P41587 438 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 ZNF699Q32M78 642 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 ARHGAP15Q53QZ3 475 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 ZNF667Q5HYK9 610 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 VSTM1Q6UX27 236 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 MFSD6LQ8IWD5 586 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 FAM186BQ8IYM0 893 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 CEP295NLQ96MC4 621 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 TRMT61BQ9BVS5 477 aaKnown RBP20.61■□□□□ 0.89
TCF3-219ENST00000610756 TASP1Q9H6P5 420 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 CHMP5Q9NZZ3 219 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 ZMYM5Q9UJ78 669 aa20.61■□□□□ 0.89
TCF3-219ENST00000610756 NME7Q9Y5B8 376 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms