RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CHPFQ8IZ52 775 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 OR56A1Q8NGH5 318 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 TBC1D15Q8TC07 691 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 RGMAQ96B86 450 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 C1GALT1C1Q96EU7 318 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 AIFM3Q96NN9 605 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 NRDE2Q9H7Z3 1164 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 MMRN2Q9H8L6 949 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 AKIP1Q9NQ31 210 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 KLHL11Q9NVR0 708 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 TCEAL9Q9UHQ7 104 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 FZD1Q9UP38 647 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 REXO2Q9Y3B8 237 aaKnown RBP4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 PCDHA3Q9Y5H8 950 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 TAF1LQ8IZX4 1826 aa4.58□□□□□ -1.68
CKS1BP3-201ENST00000600888 PAPPAQ13219 1627 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 NSD2O96028 1365 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 CDHR4A6H8M9 788 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 NT5C1B-RDH14C9J2C7 533 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 FZD7O75084 574 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 SLC43A1O75387 559 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 SCGB1D2O95969 90 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 FTLP02792 175 aaPredicted RBP4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 CD1AP06126 327 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 HSPA5P11021 654 aaKnown RBP4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 HSPA6P17066 643 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 LAG3P18627 525 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 LPOP22079 712 aaPredicted RBP4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 PTGS2P35354 604 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 AMPHP49418 695 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 NOMO3P69849 1222 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 NOGQ13253 232 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 ZNF267Q14586 743 aaPredicted RBP4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 FLYWCH1Q4VC44 716 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 NOMO2Q5JPE7 1267 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 UTP14CQ5TAP6 766 aaKnown RBP4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 SLC4A10Q6U841 1118 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 RHOUQ7L0Q8 258 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 EPM2AIP1Q7L775 607 aaPredicted RBP4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 MAPKAPK5Q8IW41 473 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 SLC35G2Q8TBE7 412 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 ZNF483Q8TF39 744 aaPredicted RBP4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 DIS3LQ8TF46 1054 aaKnown RBP4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 NUP133Q8WUM0 1156 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 LENG9Q96B70 501 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 MYEOVQ96EZ4 313 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 MARS2Q96GW9 593 aaKnown RBP4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 LRGUKQ96M69 825 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 PACSIN1Q9BY11 444 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 KMT5AQ9NQR1 393 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 SIDT1Q9NXL6 827 aaKnown RBP4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 JKAMPQ9P055 326 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 NOB1Q9ULX3 412 aaKnown RBP4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 FPGT-TNNI3KV9GXZ4 949 aa4.57□□□□□ -1.68
CKS1BP3-201ENST00000600888 SMG6Q86US8 1419 aaKnown RBP4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 TUBGCP6Q96RT7 1819 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 A0A1B0GTW7 788 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 TMEM200CA6NKL6 621 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 PRPF3O43395 683 aaKnown RBP4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 AGFG2O95081 481 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 ZNF202O95125 648 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 NDUFA10O95299 355 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 ALDH2P05091 517 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 CFIP05156 583 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 ELANEP08246 267 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 FTH1P19P0C7X4 201 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 MAKP20794 623 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 BMPR1AP36894 532 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 BEAN1Q3B7T3 259 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 FAM102BQ5T8I3 360 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 CXorf57Q6NSI4 855 aaKnown RBP4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 B3GNT9Q6UX72 402 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 LRRC55Q6ZSA7 311 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 HEATR3Q7Z4Q2 680 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 MRGPREQ86SM8 312 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 SYNE4Q8N205 404 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 TMEM132CQ8N3T6 1108 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 CLIP3Q96DZ5 547 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 ZSWIM1Q9BR11 485 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 RNPEPQ9H4A4 650 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 METTL14Q9HCE5 456 aaKnown RBP4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 NMRK2Q9NPI5 230 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 ANLNQ9NQW6 1124 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 DKK2Q9UBU2 259 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 ABCF2Q9UG63 623 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 SLC45A2Q9UMX9 530 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 MAP3K2Q9Y2U5 619 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 HS3ST3A1Q9Y663 406 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 MEGF6O75095 1541 aa4.56□□□□□ -1.68
CKS1BP3-201ENST00000600888 TOGARAM1Q9Y4F4 1720 aa4.55□□□□□ -1.68
CKS1BP3-201ENST00000600888 ZNF831Q5JPB2 1677 aa4.55□□□□□ -1.68
CKS1BP3-201ENST00000600888 CCDC78A2IDD5 438 aa4.55□□□□□ -1.68
CKS1BP3-201ENST00000600888 MARCH11A6NNE9 402 aa4.55□□□□□ -1.68
CKS1BP3-201ENST00000600888 TSPAN6O43657 245 aa4.55□□□□□ -1.68
CKS1BP3-201ENST00000600888 PPFIA4O75335 1185 aa4.55□□□□□ -1.68
CKS1BP3-201ENST00000600888 FSHBP01225 129 aa4.55□□□□□ -1.68
CKS1BP3-201ENST00000600888 HLA-DOAP06340 250 aa4.55□□□□□ -1.68
CKS1BP3-201ENST00000600888 U2AF1L5P0DN76 240 aaPredicted RBP4.55□□□□□ -1.68
CKS1BP3-201ENST00000600888 PRDX5P30044 214 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms