RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 GTF3C4Q9UKN8 822 aa18.47■□□□□ 0.55
SHKBP1-212ENST00000596163 PI4K2BG5E9Z4 385 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 CCDC192P0DO97 292 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 LMO2P25791 158 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 NLRP12P59046 1061 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 NTHL1P78549 312 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 CETN1Q12798 172 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 CT47A1Q5JQC4 288 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 TNIP3Q96KP6 325 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 CRISPLD1Q9H336 500 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 CYP3A43Q9HB55 503 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 RAB20Q9NX57 234 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 IGSF9Q9P2J2 1179 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 LIMD1Q9UGP4 676 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 CDH7Q9ULB5 785 aa18.46■□□□□ 0.55
SHKBP1-212ENST00000596163 MYBPHLA2RUH7 354 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 N4BP1O75113 896 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 LAMP2P13473 410 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 PTPN1P18031 435 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 TPD52L1Q16890 204 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 CFAP221Q4G0U5 840 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 DNAJB7Q7Z6W7 309 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 UNC93AQ86WB7 457 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 TTC39CQ8N584 583 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 MYCBPAPQ8TBZ2 947 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 PSMG2Q969U7 264 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 MYADMQ96S97 322 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 PKMYT1Q99640 499 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 PI4K2AQ9BTU6 479 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 SMYD3Q9H7B4 428 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 TMLHEQ9NVH6 421 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 GDE1Q9NZC3 331 aa18.45■□□□□ 0.54
SHKBP1-212ENST00000596163 MYL4P12829 197 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 ERCC5P28715 1186 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 MAGEA11P43364 429 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 EPHA5P54756 1037 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 CDH8P55286 799 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 MARSP56192 900 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 PSMC1P62191 440 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 NOP14P78316 857 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 PTPN21Q16825 1174 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 VSTM1Q6UX27 236 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 SCARA5Q6ZMJ2 495 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 ITFG1Q8TB96 612 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 FGF13Q92913 245 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 SLC35C1Q96A29 364 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 C1QTNF1Q9BXJ1 281 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 NIF3L1Q9GZT8 377 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 MUTYHQ9UIF7 546 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 COQ4Q9Y3A0 265 aa18.44■□□□□ 0.54
SHKBP1-212ENST00000596163 PMM2O15305 246 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 P4HA2O15460 535 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 ATP2C2O75185 946 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 CSH1P0DML2 217 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 CSH2P0DML3 217 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 CYP27A1Q02318 531 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 SPOPLQ6IQ16 392 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 MTSS1LQ765P7 747 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 HS6ST3Q8IZP7 471 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 TTC9BQ8N6N2 239 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 CEP295NLQ96MC4 621 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 BCO2Q9BYV7 579 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 GPR88Q9GZN0 384 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 FAM124BQ9H5Z6 455 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 CRTAC1Q9NQ79 661 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 SORCS3Q9UPU3 1222 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 NCOR1O75376 2440 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 ATP8B3O60423 1300 aa18.43■□□□□ 0.54
SHKBP1-212ENST00000596163 HCRTO43612 131 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 SOAT2O75908 522 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 CYP2F1P24903 491 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 ASPAP45381 313 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 RAP1GAPP47736 663 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 FMO5P49326 533 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 MTMR3Q13615 1198 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 CBWD6Q4V339 395 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 MDH1BQ5I0G3 518 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 CBWD3Q5JTY5 395 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 PRSS36Q5K4E3 855 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 CBWD5Q5RIA9 395 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 CCDC183Q5T5S1 534 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 SASS6Q6UVJ0 657 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 FAM114A1Q8IWE2 563 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 SCN4BQ8IWT1 228 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 UBALD2Q8IYN6 164 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 B3GALNT2Q8NCR0 500 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 GIPC2Q8TF65 315 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 EDAQ92838 391 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 MYLPFQ96A32 169 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 GCNAQ96QF7 691 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 DNAJC25Q9H1X3 360 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 KCNK12Q9HB15 430 aa18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHKBP1-212ENST00000596163 ATF6P18850 670 aa18.41■□□□□ 0.54
SHKBP1-212ENST00000596163 PTMSP20962 102 aa18.41■□□□□ 0.54
SHKBP1-212ENST00000596163 ANXA13P27216 316 aa18.41■□□□□ 0.54
SHKBP1-212ENST00000596163 CDC25CP30307 473 aa18.41■□□□□ 0.54
SHKBP1-212ENST00000596163 GRIK1P39086 918 aa18.41■□□□□ 0.54
SHKBP1-212ENST00000596163 CDR1P51861 262 aa18.41■□□□□ 0.54
SHKBP1-212ENST00000596163 ZXDAP98168 799 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms