RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 MGAT5BQ3V5L5 792 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 ZC2HC1CQ53FD0 456 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 LONP2Q86WA8 852 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 THEM5Q8N1Q8 247 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 SYNPOQ8N3V7 929 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 SPPL2BQ8TCT7 592 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 CHAMP1Q96JM3 812 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 ZFYVE19Q96K21 471 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 RBM12Q9NTZ6 932 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 GTSE1Q9NYZ3 720 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 AGO2Q9UKV8 859 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 CEP250Q9BV73 2442 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 HRO43593 1189 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 GCNT3O95395 438 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 PFKFB1P16118 471 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 DMWDQ09019 674 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 SPEM2Q0P670 501 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 Q6ZS52 159 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 NT5DC4Q86YG4 428 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 GPIHBP1Q8IV16 184 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 FAM200AQ8TCP9 573 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 CCDC34Q96HJ3 373 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 GCNAQ96QF7 691 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 ACCSQ96QU6 501 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 DPP3Q9NY33 737 aa18.9■□□□□ 0.62
SHKBP1-203ENST00000594298 FAM237AA0A1B0GTK4 181 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 CHURC1-FNTBB4DL54 471 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 TISP43B9A030 160 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 HAPLN1P10915 354 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 SYKP43405 635 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 FNTBP49356 437 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 CYP4F8P98187 520 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 SIM2Q14190 667 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 POSTNQ15063 836 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 LPAL2Q16609 132 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 WSCD1Q658N2 575 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 CRELD2Q6UXH1 353 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 PRR23BQ6ZRT6 265 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 LRRTM3Q86VH5 581 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 FSIP1Q8NA03 581 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 SLC46A2Q9BY10 475 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 TMEM206Q9H813 350 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 THG1LQ9NWX6 298 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 TBC1D7Q9P0N9 293 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 SERTAD1Q9UHV2 236 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 HPSEQ9Y251 543 aa18.89■□□□□ 0.61
SHKBP1-203ENST00000594298 TSC2P49815 1807 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 PVALEFA0A1B0GWK0 134 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 KPNA7A9QM74 516 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 PPP1R37O75864 691 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 IL18RAPO95256 599 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 MYL1P05976 194 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 ADSSP30520 456 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 AFMP43652 599 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 TNK2Q07912 1038 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 PON2Q15165 354 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 ITPRIPL2Q3MIP1 535 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 SV2CQ496J9 727 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 L1TD1Q5T7N2 865 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 UNC13DQ70J99 1090 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 EFCAB13Q8IY85 973 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 DCP1BQ8IZD4 617 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 TTC8Q8TAM2 541 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 STRA6Q9BX79 667 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 GDPD2Q9HCC8 539 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 CHMP5Q9NZZ3 219 aa18.88■□□□□ 0.61
SHKBP1-203ENST00000594298 SOBPA7XYQ1 873 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 DDX6P26196 483 aaKnown RBP eCLIP18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 PNPLA4P41247 253 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 TAF12Q16514 161 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 TMEM150AQ86TG1 271 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 SYCP3Q8IZU3 236 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 CMTM8Q8IZV2 173 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 NETO1Q8TDF5 533 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 GIPC2Q8TF65 315 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 POMGNT1Q8WZA1 660 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 ZNF560Q96MR9 790 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 FAM83CQ9BQN1 747 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 SEMA4GQ9NTN9 838 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 C2orf42Q9NWW7 574 aa18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 ABI2Q9NYB9 513 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-203ENST00000594298 NUP210Q8TEM1 1887 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 ACTN4O43707 911 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 FOXD2O60548 495 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 F11P03951 625 aa18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 HMGA1P17096 107 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 NDUFA8P51970 172 aa18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 CSRP2Q16527 193 aa18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 WDR5BQ86VZ2 330 aa18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 CCDC47Q96A33 483 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 PAGE5Q96GU1 130 aa18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 SMG9Q9H0W8 520 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 BLZF1Q9H2G9 400 aa18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 IKZF4Q9H2S9 585 aa18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 PCDHB5Q9Y5E4 795 aa18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-203ENST00000594298 SLC30A4O14863 429 aa18.85■□□□□ 0.61
SHKBP1-203ENST00000594298 AVPR1AP37288 418 aa18.85■□□□□ 0.61
SHKBP1-203ENST00000594298 NLRP12P59046 1061 aa18.85■□□□□ 0.61
SHKBP1-203ENST00000594298 SRSF5Q13243 272 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms