RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 PTPN4P29074 926 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 GCKP35557 465 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 GJC1P36383 396 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 BLMHQ13867 455 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 FAM91A1Q658Y4 838 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 KAZNQ674X7 775 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 ZPBP2Q6X784 338 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 OTOAQ7RTW8 1153 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 CHSY1Q86X52 802 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 CCDC125Q86Z20 511 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 WDR49Q8IV35 697 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 ZNF276Q8N554 614 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 NAT8LQ8N9F0 302 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 FAM13CQ8NE31 585 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 DEPTORQ8TB45 409 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 MSTO1Q9BUK6 570 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 TBC1D10AQ9BXI6 508 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 NIFKQ9BYG3 293 aaKnown RBP13.02□□□□□ -0.32
PDE4A-207ENST00000590407 RPAP3Q9H6T3 665 aaPredicted RBP13.02□□□□□ -0.32
PDE4A-207ENST00000590407 SLCO1B3Q9NPD5 702 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 STRIP2Q9ULQ0 834 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 ZNRF3Q9ULT6 936 aa13.02□□□□□ -0.32
PDE4A-207ENST00000590407 MAFBQ9Y5Q3 323 aaPredicted RBP13.02□□□□□ -0.32
PDE4A-207ENST00000590407 F8VP50 259 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 K7ERI5 159 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 TGDSO95455 350 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 KRT7P08729 469 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 TPBGLP0DKB5 382 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 TCF4P15884 667 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 IBSPP21815 317 aaPredicted RBP13.02□□□□□ -0.33
PDE4A-207ENST00000590407 GLRA2P23416 452 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 ICAM3P32942 547 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 RFC5P40937 340 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 TGFB2P61812 414 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 OGDHQ02218 1023 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 SURF1Q15526 300 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 GNPTABQ3T906 1256 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 CIAPIN1Q6FI81 312 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 DCUN1D2Q6PH85 259 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 LVRNQ6Q4G3 990 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 THNSL1Q8IYQ7 743 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 BANPQ8N9N5 519 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 ASAP3Q8TDY4 903 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 SPOCK2Q92563 424 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 FAXDC2Q96IV6 333 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 FAM84AQ96KN4 292 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 TEPSINQ96N21 525 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 MCEEQ96PE7 176 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 MAK16Q9BXY0 300 aaKnown RBP13.02□□□□□ -0.33
PDE4A-207ENST00000590407 TRIM6Q9C030 488 aaPredicted RBP13.02□□□□□ -0.33
PDE4A-207ENST00000590407 ANKFY1Q9P2R3 1169 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 CORO1CQ9ULV4 474 aaPredicted RBP13.02□□□□□ -0.33
PDE4A-207ENST00000590407 ADAMTS5Q9UNA0 930 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 PPME1Q9Y570 386 aa13.02□□□□□ -0.33
PDE4A-207ENST00000590407 COL4A5P29400 1685 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.01□□□□□ -0.33
PDE4A-207ENST00000590407 LRRD1A4D1F6 860 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 WNT10BO00744 389 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 DNAJC6O75061 913 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 SMNDC1O75940 238 aaKnown RBP eCLIP13.01□□□□□ -0.33
PDE4A-207ENST00000590407 OATP04181 439 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 WEE2P0C1S8 567 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 DHRS4L1P0CG22 281 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 ETS1P14921 441 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 TARSP26639 723 aaKnown RBP13.01□□□□□ -0.33
PDE4A-207ENST00000590407 ADCY1Q08828 1119 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 CTC1Q2NKJ3 1217 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 NLRP9Q7RTR0 991 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 TRMT1LQ7Z2T5 733 aaKnown RBP13.01□□□□□ -0.33
PDE4A-207ENST00000590407 APLFQ8IW19 511 aaPredicted RBP13.01□□□□□ -0.33
PDE4A-207ENST00000590407 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.01□□□□□ -0.33
PDE4A-207ENST00000590407 C4orf33Q8N1A6 199 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 OR5B17Q8NGF7 314 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 PYROXD1Q8WU10 500 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 CPT1BQ92523 772 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 NIF3L1Q9GZT8 377 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 LHX5Q9H2C1 402 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 KIF9Q9HAQ2 790 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 KLHL11Q9NVR0 708 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 HAO1Q9UJM8 370 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 RLFQ13129 1914 aa13.01□□□□□ -0.33
PDE4A-207ENST00000590407 MYH9P35579 1960 aaKnown RBP13□□□□□ -0.33
PDE4A-207ENST00000590407 IGKV6D-21A0A0A0MT36 114 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 A0A1W2PPM1 405 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 SIGLEC16A6NMB1 481 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 SGK1O00141 431 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 SPAG6O75602 509 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 KRT4P19013 534 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 CTCFP49711 727 aaPredicted RBP13□□□□□ -0.33
PDE4A-207ENST00000590407 SLC25A11Q02978 314 aaKnown RBP13□□□□□ -0.33
PDE4A-207ENST00000590407 TNFAIP1Q13829 316 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 SGSM1Q2NKQ1 1148 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 MTERF2Q49AM1 385 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 CLNKQ7Z7G1 428 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 DCAKDQ8WVC6 231 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 ATG4CQ96DT6 458 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 NAF1Q96HR8 494 aaKnown RBP13□□□□□ -0.33
PDE4A-207ENST00000590407 C12orf42Q96LP6 360 aa13□□□□□ -0.33
PDE4A-207ENST00000590407 TARS2Q9BW92 718 aaKnown RBP13□□□□□ -0.33
PDE4A-207ENST00000590407 ZFP69BQ9UJL9 534 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms