RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 NUCKS1Q9H1E3 243 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 CRTAC1Q9NQ79 661 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 IMPACTQ9P2X3 320 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 PCDHGC5Q9Y5F6 944 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 MYH10P35580 1976 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 MTCL1Q9Y4B5 1905 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 HIDE1A8MVS5 230 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 AKR1B15C9JRZ8 316 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 MFAP3LO75121 409 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 CNPP09543 421 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 OR4Q2P0C623 313 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 FERP16591 822 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 OR1D2P34982 312 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 NDUFV1P49821 464 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 ARID5BQ14865 1188 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 CCDC142Q17RM4 750 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 SFMBT2Q5VUG0 894 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 E4F1Q66K89 784 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 CNGA4Q8IV77 575 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 FMNL3Q8IVF7 1028 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 C12orf29Q8N999 325 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 MYCBPAPQ8TBZ2 947 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 SYN2Q92777 582 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 HEXIM2Q96MH2 286 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 KLHL5Q96PQ7 755 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 LPIN3Q9BQK8 851 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 ACP6Q9NPH0 428 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 TMLHEQ9NVH6 421 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 AIPL1Q9NZN9 384 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 GTF3C4Q9UKN8 822 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 KIAA1257Q9ULG3 409 aa16.92■□□□□ 0.3
CSNK1D-212ENST00000580061 TEX28O15482 410 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 CALCAP01258 141 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 VDRP11473 427 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 CPB1P15086 417 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 GNA15P30679 374 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 ADKP55263 362 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 ARPP19P56211 112 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 BPIFB4P59827 614 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 ROR1Q01973 937 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 PTK2Q05397 1052 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 GOLGA8FQ08AF8 430 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 GOLGA8DPQ0D2H9 430 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 GPR17Q13304 367 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 RAB33AQ14088 237 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 MDH1BQ5I0G3 518 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 ZNF697Q5TEC3 545 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 IRF2BP2Q7Z5L9 587 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 SLC47A2Q86VL8 602 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 GPIHBP1Q8IV16 184 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 GLYCTKQ8IVS8 523 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 DCP1BQ8IZD4 617 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 TC2NQ8N9U0 490 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 MRPL38Q96DV4 380 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 EMILIN2Q9BXX0 1053 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 ABHD10Q9NUJ1 306 aa16.91■□□□□ 0.3
CSNK1D-212ENST00000580061 MYO7AQ13402 2215 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 WDR27A2RRH5 827 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 CCDC172P0C7W6 258 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 CD19P15391 556 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 CYP11B1P15538 503 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 HNRNPH3P31942 346 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 ARID5AQ03989 594 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 GRIN2CQ14957 1233 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 MAPRE1Q15691 268 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 ASIC2Q16515 512 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 NFE2Q16621 373 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 PTPROQ16827 1216 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 SLC39A12Q504Y0 691 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 SGO2Q562F6 1265 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 ARHGAP17Q68EM7 881 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 OR8K1Q8NGG5 319 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 EPS8L1Q8TE68 723 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 TFAP2BQ92481 460 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 MYLPFQ96A32 169 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 CYFIP2Q96F07 1278 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 PCED1BQ96HM7 432 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 DNAJC7Q99615 494 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 ZSWIM1Q9BR11 485 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 PRDM12Q9H4Q4 367 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 FAM49BQ9NUQ9 324 aa16.9■□□□□ 0.3
CSNK1D-212ENST00000580061 ABLIM3O94929 683 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 ADH1AP07327 375 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 CCDC130P13994 396 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 BRD2P25440 801 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 PRKCIP41743 596 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 PDE6CP51160 858 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 SMARCB1Q12824 385 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 HABP4Q5JVS0 413 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 PPP1R26Q5T8A7 1209 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 RNF19BQ6ZMZ0 732 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 PAQR9Q6ZVX9 377 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 FUKQ8N0W3 1084 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 ZNF461Q8TAF7 563 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 ZNF606Q8WXB4 792 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 PDLIM2Q96JY6 352 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 PGLYRP2Q96PD5 576 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 B3GNT5Q9BYG0 378 aa16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 NOCTQ9UK39 431 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-212ENST00000580061 MTMR11A4FU01 709 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms