RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CACNA1BQ00975 2339 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 LRRC37A2A6NM11 1700 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 VSTM5A8MXK1 200 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 ERC2O15083 957 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 EIF5BO60841 1220 aaKnown RBP6.43□□□□□ -1.38
SF3B3-214ENST00000572365 DDX58O95786 925 aaKnown RBP6.43□□□□□ -1.38
SF3B3-214ENST00000572365 ZNF28P17035 718 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 RPL13P26373 211 aaKnown RBP6.43□□□□□ -1.38
SF3B3-214ENST00000572365 SLC16A1P53985 500 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 NRG3P56975 720 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 CCT2P78371 535 aaKnown RBP6.43□□□□□ -1.38
SF3B3-214ENST00000572365 FPGSQ05932 587 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 DLX2Q07687 328 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-214ENST00000572365 NEXNQ0ZGT2 675 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 TOP3AQ13472 1001 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-214ENST00000572365 MUM1L1Q5H9M0 696 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 ATAT1Q5SQI0 421 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 OTOP2Q7RTS6 562 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 GPR142Q7Z601 462 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 DGKHQ86XP1 1220 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 PPM1NQ8N819 430 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 GLB1L3Q8NCI6 653 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-214ENST00000572365 GPRC5AQ8NFJ5 357 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 SLC35G2Q8TBE7 412 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 LPAR1Q92633 364 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 USP6NLQ92738 828 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 NKD2Q969F2 451 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-214ENST00000572365 RUNDC1Q96C34 613 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 EDC3Q96F86 508 aaKnown RBP6.43□□□□□ -1.38
SF3B3-214ENST00000572365 OBP2AQ9NY56 170 aa6.43□□□□□ -1.38
SF3B3-214ENST00000572365 DNM1LO00429 736 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 CAND2O75155 1236 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 OFD1O75665 1012 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 RGS2P41220 211 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 MCAMP43121 646 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 ETV4P43268 484 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 GCLCP48506 637 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-214ENST00000572365 IRX3P78415 501 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-214ENST00000572365 JAG1P78504 1218 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 MAN2A1Q16706 1144 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 LRRC24Q50LG9 513 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 IFIT1BQ5T764 474 aaKnown RBP6.42□□□□□ -1.38
SF3B3-214ENST00000572365 FKBP1CQ5VVH2 108 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 MFSD14CQ5VZR4 134 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 TRMT10BQ6PF06 316 aaKnown RBP6.42□□□□□ -1.38
SF3B3-214ENST00000572365 LILRA6Q6PI73 481 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 ZNF365Q70YC5 407 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 PLEKHH3Q7Z736 793 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 PRR18Q8N4B5 295 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 UBE2Q2Q8WVN8 375 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 HPS3Q969F9 1004 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 LRGUKQ96M69 825 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 WDR92Q96MX6 357 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 GTPBP4Q9BZE4 634 aaKnown RBP6.42□□□□□ -1.38
SF3B3-214ENST00000572365 DDX4Q9NQI0 724 aaKnown RBP6.42□□□□□ -1.38
SF3B3-214ENST00000572365 MAGEL2Q9UJ55 1249 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 SLC45A1Q9Y2W3 748 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 VWA7Q9Y334 891 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 IPPQ9Y573 584 aa6.42□□□□□ -1.38
SF3B3-214ENST00000572365 MYO7AQ13402 2215 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 A0A1W2PR48 441 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 KBTBD13C9JR72 458 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 PI4K2BG5E9Z4 385 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 AP1G1O43747 822 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 CTNND1O60716 968 aaKnown RBP6.41□□□□□ -1.38
SF3B3-214ENST00000572365 TMEM127O75204 238 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 KRT1P04264 644 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 CLTBP09497 229 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 CSF2RAP15509 400 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 PDCP20941 246 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 EDNRBP24530 442 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 PRDX5P30044 214 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 MEF2AQ02078 507 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-214ENST00000572365 PPP3CAQ08209 521 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 UBE4AQ14139 1066 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 GBX1Q14549 363 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 SSPNQ14714 243 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 CCDC57Q2TAC2 916 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 UAP1L1Q3KQV9 507 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 TRIM68Q6AZZ1 485 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 CNKSR3Q6P9H4 555 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 SYDE1Q6ZW31 735 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-214ENST00000572365 USP45Q70EL2 814 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 CATIPQ7Z7H3 387 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 KLHDC4Q8TBB5 520 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 TAAR9Q96RI9 348 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 PLA2G12BQ9BX93 195 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 SAP30BPQ9UHR5 308 aaKnown RBP6.41□□□□□ -1.38
SF3B3-214ENST00000572365 DNAI1Q9UI46 699 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 RCAN3Q9UKA8 241 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 CDC42EP3Q9UKI2 254 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 LIMCH1Q9UPQ0 1083 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 MYO15AQ9UKN7 3530 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 ZNF318Q5VUA4 2279 aa6.41□□□□□ -1.38
SF3B3-214ENST00000572365 SH3D21A4FU49 640 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 EPOPA6NHQ4 379 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 HTRA2O43464 458 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-214ENST00000572365 FSBPO95073 299 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 LY86O95711 162 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 PGK1P00558 417 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms