RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 ZNF341Q9BYN7 854 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 OBP2AQ9NY56 170 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 AFG3L2Q9Y4W6 797 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 ZHX2Q9Y6X8 837 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 DNAH12Q6ZR08 3092 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 DOCK3Q8IZD9 2030 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 MYBBP1AQ9BQG0 1328 aaKnown RBP7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 ERC2O15083 957 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 CTNND1O60716 968 aaKnown RBP7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 DTNBO60941 627 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 CAND2O75155 1236 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 TMEM127O75204 238 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 NBPF7P0C2Y1 421 aaPredicted RBP7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 ZNF888P0CJ79 500 aaPredicted RBP7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 ADSLP30566 484 aaPredicted RBP7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 PPP3CAQ08209 521 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 LRRC26Q2I0M4 334 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 TWISTNBQ3B726 338 aaPredicted RBP7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 FAM26FQ5R3K3 315 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 ATAT1Q5SQI0 421 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 ABHD15Q6UXT9 468 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 UNC5BQ8IZJ1 945 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 PIK3C3Q8NEB9 887 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 FAM151AQ8WW52 585 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 GCDHQ92947 438 aaPredicted RBP7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 HPS3Q969F9 1004 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 HDAC10Q969S8 669 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 TEKT1Q969V4 418 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 KIAA1683Q9H0B3 1180 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 CNNM1Q9NRU3 951 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 ADAM29Q9UKF5 820 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 IPPQ9Y573 584 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 RBM8AQ9Y5S9 174 aaKnown RBP7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 COL2A1P02458 1487 aaPredicted RBP7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 PLXNB2O15031 1838 aa7.04□□□□□ -1.28
HERPUD1-208ENST00000563911 C2orf78A6NCI8 922 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 DDTLA6NHG4 134 aaPredicted RBP7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 CXCL11O14625 94 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 NUAK1O60285 661 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 KRT18P05783 430 aaKnown RBP7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 FGFR2P21802 821 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 EDNRBP24530 442 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 CSF2RBP32927 897 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 WASP42768 502 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 JAG1P78504 1218 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 MGAT2Q10469 447 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 DDX10Q13206 875 aaKnown RBP7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 WDR43Q15061 677 aaKnown RBP eCLIP7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 C3orf36Q3SXR2 165 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 B3GNT9Q6UX72 402 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 TAS1R1Q7RTX1 841 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 CLEC14AQ86T13 490 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 DGKHQ86XP1 1220 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 TMEM151BQ8IW70 566 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 PRR18Q8N4B5 295 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 ANKRD13CQ8N6S4 541 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 ANKRD44Q8N8A2 993 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 LINC01356Q8N9X3 169 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 PLA2G15Q8NCC3 412 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 SNX33Q8WV41 574 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 TRIB2Q92519 343 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 MVB12AQ96EY5 273 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 LCORQ96JN0 433 aaPredicted RBP7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 PARK7Q99497 189 aaKnown RBP7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 C7orf25Q9BPX7 421 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 OR10A2Q9H208 303 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 OGDHLQ9ULD0 1010 aa7.03□□□□□ -1.28
HERPUD1-208ENST00000563911 DDX60LQ5H9U9 1706 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 PHIPQ8WWQ0 1821 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 C9orf118A6NHY6 69 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 FAM171A2A8MVW0 826 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 GRM8O00222 908 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 TNPO2O14787 897 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 PHF2O75151 1096 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 ALDH1A2O94788 518 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 PRDX5P30044 214 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 IL10RAQ13651 578 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 HLTFQ14527 1009 aaKnown RBP eCLIP7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 CCDC57Q2TAC2 916 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 PGS1Q32NB8 556 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 ZMAT1Q5H9K5 638 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 MAP3K21Q5TCX8 1036 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 AGBL4Q5VU57 503 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 GADL1Q6ZQY3 521 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 CAMKK1Q8N5S9 505 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 POU5F2Q8N7G0 328 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 OR2I1PQ8NGU4 316 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 TAAR9Q96RI9 348 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 CDX2Q99626 313 aaPredicted RBP7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 STK31Q9BXU1 1019 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 TTYH1Q9H313 450 aaPredicted RBP7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 C11orf49Q9H6J7 331 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 MYH16Q9H6N6 1097 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 DDX4Q9NQI0 724 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 TLR9Q9NR96 1032 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 CTDP1Q9Y5B0 961 aaPredicted RBP7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 PCDHA13Q9Y5I0 950 aa7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 RPAP1Q9BWH6 1393 aaPredicted RBP7.02□□□□□ -1.29
HERPUD1-208ENST00000563911 CCDC194A0A1B0GVG4 234 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms