RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 CARD9Q9H257 536 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 ANKZF1Q9H8Y5 726 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 CASTOR2A6NHX0 329 aa20.7■□□□□ 0.91
RBFOX1-215ENST00000553186 PITPNM1O00562 1244 aa20.7■□□□□ 0.91
RBFOX1-215ENST00000553186 CEP104O60308 925 aa20.7■□□□□ 0.91
RBFOX1-215ENST00000553186 WARSP23381 471 aaKnown RBP20.7■□□□□ 0.91
RBFOX1-215ENST00000553186 MARCKSL1P49006 195 aa20.7■□□□□ 0.91
RBFOX1-215ENST00000553186 RPL7AP62424 266 aaKnown RBP20.7■□□□□ 0.91
RBFOX1-215ENST00000553186 CYP4A22Q5TCH4 519 aa20.7■□□□□ 0.91
RBFOX1-215ENST00000553186 C3orf20Q8ND61 904 aa20.7■□□□□ 0.91
RBFOX1-215ENST00000553186 SELENOOQ9BVL4 669 aa20.7■□□□□ 0.91
RBFOX1-215ENST00000553186 TMEM191CA6NGB0 347 aa20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 CYB561D2O14569 222 aa20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 PQBP1O60828 265 aaKnown RBP20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 EOMESO95936 686 aa20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 PDGFRBP09619 1106 aa20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 FAM163BP0C2L3 166 aa20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 CTNNA1P35221 906 aaKnown RBP20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 RNASE9P60153 205 aaKnown RBP20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 GRIK3Q13003 919 aa20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 PDCLQ13371 301 aa20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 OSTM1Q86WC4 334 aa20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 DNAJC5GQ8N7S2 189 aa20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 LPIN3Q9BQK8 851 aa20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 FAM49BQ9NUQ9 324 aa20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 STRIP2Q9ULQ0 834 aa20.7■□□□□ 0.9
RBFOX1-215ENST00000553186 GABRDO14764 452 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 SPOPO43791 374 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 PROSCO94903 275 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 GABRB2P47870 512 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 AARSP49588 968 aaKnown RBP eCLIP20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 GSCP56915 257 aaPredicted RBP20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 ARHGAP17Q68EM7 881 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 TTC30AQ86WT1 665 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 C18orf8Q96DM3 657 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 FTHL17Q9BXU8 183 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 SNX25Q9H3E2 840 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 TMEM59LQ9UK28 342 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 TTC7AQ9ULT0 858 aaPredicted RBP20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 ERBB2P04626 1255 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 CTNNA2P26232 953 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 SLC1A1P43005 524 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 GOLGA7BQ2TAP0 167 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 WSCD1Q658N2 575 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 DNAJC24Q6P3W2 148 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 ANKRD33Q7Z3H0 272 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 MMGT1Q8N4V1 131 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 UBL4BQ8N7F7 174 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 SENP8Q96LD8 212 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 RBM12Q9NTZ6 932 aaKnown RBP20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 INPP5FQ9Y2H2 1132 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 PCDHA3Q9Y5H8 950 aa20.69■□□□□ 0.9
RBFOX1-215ENST00000553186 TUSC3Q13454 348 aa20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 PLEKHG4Q58EX7 1191 aa20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 XYLT1Q86Y38 959 aa20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 MSANTD4Q8NCY6 345 aa20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 ZNF333Q96JL9 665 aa20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 PARD6BQ9BYG5 372 aa20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 CCDC66A2RUB6 948 aa20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 RHOXF2BP0C7M4 288 aa20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 H2AFXP16104 143 aaPredicted RBP20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 ATN1P54259 1190 aaPredicted RBP20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 SLC39A5Q6ZMH5 540 aa20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 DBF4BQ8NFT6 615 aa20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 MCEEQ96PE7 176 aa20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 RHOXF2Q9BQY4 288 aa20.68■□□□□ 0.9
RBFOX1-215ENST00000553186 PGRMC1O00264 195 aaKnown RBP20.67■□□□□ 0.9
RBFOX1-215ENST00000553186 PSMC1P62191 440 aaKnown RBP20.67■□□□□ 0.9
RBFOX1-215ENST00000553186 ZNF252P-AS1Q0IIN9 211 aa20.67■□□□□ 0.9
RBFOX1-215ENST00000553186 CLLU1OSQ5K130 101 aa20.67■□□□□ 0.9
RBFOX1-215ENST00000553186 FBXO38Q6PIJ6 1188 aa20.67■□□□□ 0.9
RBFOX1-215ENST00000553186 CD300LGQ6UXG3 332 aa20.67■□□□□ 0.9
RBFOX1-215ENST00000553186 SLC35F5Q8WV83 523 aa20.67■□□□□ 0.9
RBFOX1-215ENST00000553186 DDX27Q96GQ7 796 aaKnown RBP20.67■□□□□ 0.9
RBFOX1-215ENST00000553186 RNPC3Q96LT9 517 aaKnown RBP20.67■□□□□ 0.9
RBFOX1-215ENST00000553186 WDR35Q9P2L0 1181 aa20.67■□□□□ 0.9
RBFOX1-215ENST00000553186 SIGLEC16A6NMB1 481 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 TULP2O00295 520 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 OGDHQ02218 1023 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 TAP1Q03518 808 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 ZNF211Q13398 564 aaPredicted RBP20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 ZNF268Q14587 947 aaPredicted RBP20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 TIGD5Q53EQ6 642 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 TNIP3Q96KP6 325 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 IP6K2Q9UHH9 426 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 CCDC130P13994 396 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 MAN1A1P33908 653 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 DAB2IPQ5VWQ8 1189 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 PMF1Q6P1K2 205 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 GLB1LQ6UWU2 654 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 B3GALNT2Q8NCR0 500 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 MCRS1Q96EZ8 462 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 PNKPQ96T60 521 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 SYNCQ9H7C4 482 aa20.66■□□□□ 0.9
RBFOX1-215ENST00000553186 B3GAT3O94766 335 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 C1QTNF8P60827 252 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 FAAP100Q0VG06 881 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 KIAA0319Q5VV43 1072 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 DCUN1D2Q6PH85 259 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms