RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ACTR5Q9H9F9 607 aaPredicted RBP14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 NPHS2Q9NP85 383 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 LTBP1Q14766 1721 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 DOCK5Q9H7D0 1870 aa14.39□□□□□ -0.11
PRPF40B-209ENST00000548825 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 CCDC195A0A1B0GUA6 201 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 TP73O15350 636 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 MAFGO15525 162 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 TOM1L1O75674 476 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 RNF8O76064 485 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 FARP2O94887 1054 aaPredicted RBP14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 ZNF286BP0CG31 522 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 MYBL1P10243 752 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 HADHBP55084 474 aaKnown RBP14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 IL9RQ01113 521 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 ZBTB16Q05516 673 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 CCNG2Q16589 344 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 EAPPQ56P03 285 aaPredicted RBP14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 SGSM3Q96HU1 749 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 PCYT2Q99447 389 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 HES2Q9Y543 173 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 CYP1A1P04798 512 aaPredicted RBP14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 HIF1AQ16665 826 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 CFAP57Q96MR6 1250 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 CPXM1Q96SM3 734 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 TRIM56Q9BRZ2 755 aaKnown RBP14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 DHX33Q9H6R0 707 aaKnown RBP14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 A0A087WZ62 844 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 TCRBV7S3A2A0A539 114 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 SOWAHBA6NEL2 793 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 LIASO43766 372 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 IL1R2P27930 398 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 SLC20A2Q08357 652 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 KCTD2Q14681 263 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 NAA25Q14CX7 972 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 CYP1B1Q16678 543 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 SPATA18Q8TC71 538 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 RBM41Q96IZ5 413 aaKnown RBP14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 SERPINB12Q96P63 405 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 TWNKQ96RR1 684 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 FDXACB1Q9BRP7 624 aaPredicted RBP14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 ADPGKQ9BRR6 497 aa14.38□□□□□ -0.11
PRPF40B-209ENST00000548825 LRRC37AA6NMS7 1700 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 C10orf71Q711Q0 1435 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 C2orf71A6NGG8 1288 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 KITP10721 976 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 RBP3P10745 1247 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 EZRP15311 586 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 MMP8P22894 467 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 POLR2BP30876 1174 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 FOXN2P32314 431 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 YARSP54577 528 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 KRT81Q14533 505 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 MDH1BQ5I0G3 518 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 CASC4Q6P4E1 433 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 CENPUQ71F23 418 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 PLCD4Q9BRC7 762 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 SLC13A1Q9BZW2 595 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 SPATC1LQ9H0A9 340 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 MTA2O94776 668 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 CYP2C8P10632 490 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 MAN1A1P33908 653 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 EIF3EP60228 445 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 SNRPFP62306 86 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 ZNF252P-AS1Q0IIN9 211 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 TFDP3Q5H9I0 405 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 TRIM68Q6AZZ1 485 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 EXD1Q8NHP7 514 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 CEP41Q9BYV8 373 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 MARCOQ9UEW3 520 aaPredicted RBP14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 HAO1Q9UJM8 370 aa14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 GREB1LQ9C091 1923 aaPredicted RBP14.37□□□□□ -0.11
PRPF40B-209ENST00000548825 FAM47DPA6NHR8 397 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 MAPK13O15264 365 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 OGTO15294 1046 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 CALB1P05937 261 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 PDGFRBP09619 1106 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 PHKA2P46019 1235 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 PPP2R5DQ14738 602 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 LVRNQ6Q4G3 990 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 ARMC9Q7Z3E5 817 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 UNC45BQ8IWX7 931 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 RCOR2Q8IZ40 523 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 FITM2Q8N6M3 262 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 FBXO36Q8NEA4 188 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 STAMBPL1Q96FJ0 436 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 RNPEPQ9H4A4 650 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 AVENQ9NQS1 362 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 TMEM191CA6NGB0 347 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 CHUKO15111 745 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 PSTPIP1O43586 416 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 CBX6O95503 412 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 SETDB1Q15047 1291 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 HADHQ16836 314 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 SGSM1Q2NKQ1 1148 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 ACCSLQ4AC99 568 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 RDM1Q8NG50 284 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 FBF1Q8TES7 1133 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 PIWIL1Q96J94 861 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms