RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 SPDL1Q96EA4 605 aa12.1□□□□□ -0.47
DDB1-224ENST00000545894 SMC6Q96SB8 1091 aa12.1□□□□□ -0.47
DDB1-224ENST00000545894 MRPL47Q9HD33 250 aaKnown RBP12.1□□□□□ -0.47
DDB1-224ENST00000545894 TBC1D22BQ9NU19 505 aa12.1□□□□□ -0.47
DDB1-224ENST00000545894 HAO1Q9UJM8 370 aa12.1□□□□□ -0.47
DDB1-224ENST00000545894 E7ENQ6 273 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 POC1B-GALNT4F8VUJ3 575 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 DNALI1O14645 258 aaPredicted RBP12.09□□□□□ -0.47
DDB1-224ENST00000545894 EDF1O60869 148 aaKnown RBP12.09□□□□□ -0.47
DDB1-224ENST00000545894 SKAP2O75563 359 aaPredicted RBP12.09□□□□□ -0.47
DDB1-224ENST00000545894 KRT15P19012 456 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 GNAZP19086 355 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 CD58P19256 250 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 CALB2P22676 271 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 CETN2P41208 172 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 PSMC5P62195 406 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 PRKCZQ05513 592 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 ENPEPQ07075 957 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 MTMR1Q13613 665 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 BLMHQ13867 455 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 PCNX4Q63HM2 1172 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 PLA2G4FQ68DD2 849 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 SLC39A4Q6P5W5 647 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 LRRC8CQ8TDW0 803 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 MICAL1Q8TDZ2 1067 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 RMDN3Q96TC7 470 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 C11orf70Q9BRQ4 267 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 SLCO1B3Q9NPD5 702 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 KMT5AQ9NQR1 393 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 PXMP2Q9NR77 195 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 ANKEF1Q9NU02 776 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.09□□□□□ -0.47
DDB1-224ENST00000545894 EIF2AK2P19525 551 aaKnown RBP12.09□□□□□ -0.47
DDB1-224ENST00000545894 CYP2B6P20813 491 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 CDC25CP30307 473 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 GJC1P36383 396 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 SSR1P43307 286 aaKnown RBP12.09□□□□□ -0.47
DDB1-224ENST00000545894 FLT3LGP49771 235 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 RASSF2P50749 326 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 PKN2Q16513 984 aaKnown RBP12.09□□□□□ -0.47
DDB1-224ENST00000545894 ARHGEF16Q5VV41 709 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 CAPRIN2Q6IMN6 1127 aaKnown RBP12.09□□□□□ -0.47
DDB1-224ENST00000545894 GPD1LQ8N335 351 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 FAM13CQ8NE31 585 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 SOCS4Q8WXH5 440 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 NAF1Q96HR8 494 aaKnown RBP12.09□□□□□ -0.47
DDB1-224ENST00000545894 KIF9Q9HAQ2 790 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 NKX1-2Q9UD57 310 aaPredicted RBP12.09□□□□□ -0.47
DDB1-224ENST00000545894 SRRDQ9UH36 339 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 CORO1CQ9ULV4 474 aaPredicted RBP12.09□□□□□ -0.47
DDB1-224ENST00000545894 USTQ9Y2C2 406 aa12.09□□□□□ -0.47
DDB1-224ENST00000545894 LIASO43766 372 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 PEX11AO75192 247 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 HOXC6P09630 235 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 CA4P22748 312 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 RPA3P35244 121 aaPredicted RBP12.08□□□□□ -0.48
DDB1-224ENST00000545894 LBX1P52954 281 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 MAMLD1Q13495 774 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 WDR44Q5JSH3 913 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 SPDYAQ5MJ70 313 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 TRIM72Q6ZMU5 477 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 DNERQ8NFT8 737 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 NSUN6Q8TEA1 469 aaKnown RBP12.08□□□□□ -0.48
DDB1-224ENST00000545894 STK32AQ8WU08 396 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 C10orf82Q8WW14 230 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 SPIRE2Q8WWL2 714 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 VPS37BQ9H9H4 285 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 PPCSQ9HAB8 311 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 GRID1Q9ULK0 1009 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 PLXNB2O15031 1838 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 T-ENOLP0DO92 83 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 PECAM1P16284 738 aaPredicted RBP12.08□□□□□ -0.48
DDB1-224ENST00000545894 HOXD10P28358 340 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 RGS2P41220 211 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 CTCFP49711 727 aaPredicted RBP12.08□□□□□ -0.48
DDB1-224ENST00000545894 JAK3P52333 1124 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 MRPS9P82933 396 aaKnown RBP12.08□□□□□ -0.48
DDB1-224ENST00000545894 NFX1Q12986 1120 aaKnown RBP12.08□□□□□ -0.48
DDB1-224ENST00000545894 PGM5Q15124 567 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 CCL14Q16627 93 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 WASHC2DQ5SRD0 308 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 DRICH1Q6PGQ1 229 aaPredicted RBP12.08□□□□□ -0.48
DDB1-224ENST00000545894 C15orf39Q6ZRI6 1047 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 LONP2Q86WA8 852 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 C4orf33Q8N1A6 199 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 TEX9Q8N6V9 391 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 GLIS1Q8NBF1 620 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 SLC7A6OSQ96CW6 309 aaPredicted RBP12.08□□□□□ -0.48
DDB1-224ENST00000545894 VCPIP1Q96JH7 1222 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 MAML3Q96JK9 1138 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 PDCD2LQ9BRP1 358 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 NTPCRQ9BSD7 190 aaKnown RBP12.08□□□□□ -0.48
DDB1-224ENST00000545894 TBC1D10AQ9BXI6 508 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 SLC24A3Q9HC58 644 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 FLRT1Q9NZU1 646 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 TCEAL9Q9UHQ7 104 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 DNPEPQ9ULA0 475 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 ZNF148Q9UQR1 794 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 LRRC42Q9Y546 428 aa12.08□□□□□ -0.48
DDB1-224ENST00000545894 SCINQ9Y6U3 715 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms