RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 TAB2Q9NYJ8 693 aa14.98□□□□□ -0.01
VPS11-205ENST00000534551 COQ4Q9Y3A0 265 aa14.98□□□□□ -0.01
VPS11-205ENST00000534551 MYO10Q9HD67 2058 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 CLUHO75153 1309 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 A8MXQ7 604 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 KCNJ18B7U540 433 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 CLDN5O00501 218 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 LRG1P02750 347 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 PCSK1P29120 753 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 GNL1P36915 607 aaPredicted RBP14.97□□□□□ -0.01
VPS11-205ENST00000534551 CACNA2D1P54289 1103 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 KCNJ12Q14500 433 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 NCAPHQ15003 741 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 SLC5A9Q2M3M2 681 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 ZSCAN23Q3MJ62 389 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 ELMSAN1Q6PJG2 1045 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 CCDC149Q6ZUS6 474 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 ACOT1Q86TX2 421 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 ARHGEF19Q8IW93 802 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 B3GALNT2Q8NCR0 500 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 ST13P5Q8NFI4 369 aaPredicted RBP14.97□□□□□ -0.01
VPS11-205ENST00000534551 LMO3Q8TAP4 145 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 SPATA18Q8TC71 538 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 ENOX1Q8TC92 643 aaKnown RBP14.97□□□□□ -0.01
VPS11-205ENST00000534551 HDAC7Q8WUI4 952 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 TAF4BQ92750 862 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 PCED1BQ96HM7 432 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 CRACR2AQ9BSW2 395 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 OXCT2Q9BYC2 517 aaPredicted RBP14.97□□□□□ -0.01
VPS11-205ENST00000534551 ZNF518BQ9C0D4 1074 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 ELOVL4Q9GZR5 314 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 HSD3B7Q9H2F3 369 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 TMEM30AQ9NV96 361 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 GCNT4Q9P109 453 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 CEP72Q9P209 647 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 DNMT3BQ9UBC3 853 aaKnown RBP14.97□□□□□ -0.01
VPS11-205ENST00000534551 CDH9Q9ULB4 789 aa14.97□□□□□ -0.01
VPS11-205ENST00000534551 NUP210Q8TEM1 1887 aaPredicted RBP14.97□□□□□ -0.01
VPS11-205ENST00000534551 N4BP1O75113 896 aaKnown RBP14.96□□□□□ -0.01
VPS11-205ENST00000534551 PAPLNO95428 1278 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 C1RP00736 705 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 CCDC130P13994 396 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 CYP2F1P24903 491 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 HOXA9P31269 272 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 MTHFRP42898 656 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 MYL5Q02045 173 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 CYP27A1Q02318 531 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 MAN2A1Q16706 1144 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 PUS10Q3MIT2 529 aaKnown RBP14.96□□□□□ -0.01
VPS11-205ENST00000534551 ZNF394Q53GI3 561 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 MIIPQ5JXC2 388 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 CDKAL1Q5VV42 579 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 FAM171BQ6P995 826 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 GJB7Q6PEY0 223 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 DCP1BQ8IZD4 617 aaKnown RBP14.96□□□□□ -0.01
VPS11-205ENST00000534551 CCDC150Q8NCX0 1101 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 WHAMMQ8TF30 809 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 GIPC2Q8TF65 315 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 ING5Q8WYH8 240 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 RPGRIP1Q96KN7 1286 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 RIPOR3Q96MK2 946 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 INTS2Q9H0H0 1204 aaKnown RBP14.96□□□□□ -0.01
VPS11-205ENST00000534551 ZNF334Q9HCZ1 680 aaPredicted RBP14.96□□□□□ -0.01
VPS11-205ENST00000534551 FAM49BQ9NUQ9 324 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 FANCLQ9NW38 375 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 DPP7Q9UHL4 492 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 AJAP1Q9UKB5 411 aaPredicted RBP14.96□□□□□ -0.01
VPS11-205ENST00000534551 PCDHB5Q9Y5E4 795 aa14.96□□□□□ -0.01
VPS11-205ENST00000534551 C2CD4DB7Z1M9 353 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 CALCAP01258 141 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 HNRNPA1P09651 372 aaKnown RBP eCLIP14.95□□□□□ -0.02
VPS11-205ENST00000534551 HAPLN1P10915 354 aaPredicted RBP14.95□□□□□ -0.02
VPS11-205ENST00000534551 P4HA1P13674 534 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 PRKCSHP14314 528 aaPredicted RBP14.95□□□□□ -0.02
VPS11-205ENST00000534551 GJA1P17302 382 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 PTPN1P18031 435 aaKnown RBP14.95□□□□□ -0.02
VPS11-205ENST00000534551 PTMSP20962 102 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 BDNFP23560 247 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 CCR2P41597 374 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 INCA1Q0VD86 236 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 PLD1Q13393 1074 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 MTMR3Q13615 1198 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 CUL2Q13617 745 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 TCP11X2Q5H9J9 407 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 ATAT1Q5SQI0 421 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 POTEHQ6S545 545 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 SPATA2LQ8IUW3 424 aaPredicted RBP14.95□□□□□ -0.02
VPS11-205ENST00000534551 FAM114A1Q8IWE2 563 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 DHX40Q8IX18 779 aaKnown RBP14.95□□□□□ -0.02
VPS11-205ENST00000534551 C12orf29Q8N999 325 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 ITFG1Q8TB96 612 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 TCEAL4Q96EI5 215 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 MYADMQ96S97 322 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 UHRF1Q96T88 793 aaPredicted RBP14.95□□□□□ -0.02
VPS11-205ENST00000534551 CORO1BQ9BR76 489 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 PHF7Q9BWX1 381 aaPredicted RBP14.95□□□□□ -0.02
VPS11-205ENST00000534551 COL25A1Q9BXS0 654 aaPredicted RBP14.95□□□□□ -0.02
VPS11-205ENST00000534551 B3GNT5Q9BYG0 378 aa14.95□□□□□ -0.02
VPS11-205ENST00000534551 WDR6Q9NNW5 1121 aaKnown RBP14.95□□□□□ -0.02
VPS11-205ENST00000534551 MAGEC2Q9UBF1 373 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms