RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 TMEM108Q6UXF1 575 aa5.41□□□□□ -1.54
CTHRC1-204ENST00000520880 FAM46DQ8NEK8 389 aa5.41□□□□□ -1.54
CTHRC1-204ENST00000520880 ATRIPQ8WXE1 791 aa5.41□□□□□ -1.54
CTHRC1-204ENST00000520880 REPS1Q96D71 796 aa5.41□□□□□ -1.54
CTHRC1-204ENST00000520880 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.41□□□□□ -1.54
CTHRC1-204ENST00000520880 CUX1P39880 1505 aa5.41□□□□□ -1.54
CTHRC1-204ENST00000520880 RUSC2Q8N2Y8 1516 aa5.41□□□□□ -1.54
CTHRC1-204ENST00000520880 ZNF213O14771 459 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 NXPH3O95157 252 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 LATS1O95835 1130 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 FTLP02792 175 aaPredicted RBP5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 GNAI2P04899 355 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 NHLRC4P0CG21 123 aaPredicted RBP5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 TYRP14679 529 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 NDUFB7P17568 137 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 RECQLP46063 649 aaPredicted RBP5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 MAP2K6P52564 334 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 SSBP2P81877 361 aaPredicted RBP5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 PROSER3Q2NL68 480 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 USP45Q70EL2 814 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 MAVSQ7Z434 540 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 CPA6Q8N4T0 437 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 LMBRD1Q9NUN5 540 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 PCDHA1Q9Y5I3 950 aa5.4□□□□□ -1.54
CTHRC1-204ENST00000520880 FNDC1Q4ZHG4 1894 aaPredicted RBP5.4□□□□□ -1.55
CTHRC1-204ENST00000520880 KIF21BO75037 1637 aa5.4□□□□□ -1.55
CTHRC1-204ENST00000520880 DCLK1O15075 740 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 DTNBO60941 627 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 FAM163BP0C2L3 166 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 PRR35P0CG20 571 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 PIM1P11309 404 aaPredicted RBP5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 LIPAP38571 399 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 SP2Q02086 613 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 EXOSC9Q06265 439 aaKnown RBP5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 MTX3Q5HYI7 312 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 ZNF618Q5T7W0 954 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 FAM160B1Q5W0V3 765 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 ZNF626Q68DY1 528 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 CEP85Q6P2H3 762 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 ZNF66Q6ZN08 573 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 CATIPQ7Z7H3 387 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 DTX2Q86UW9 622 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 DDX17Q92841 729 aaKnown RBP5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 SLC46A1Q96NT5 459 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 SH3BP4Q9P0V3 963 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 ZNF804BA4D1E1 1349 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 CADPSQ9ULU8 1353 aa5.39□□□□□ -1.55
CTHRC1-204ENST00000520880 H0YIZ8 118 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 TP73O15350 636 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 IGSF3O75054 1194 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 DNAJB5O75953 348 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 JTBO76095 146 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 SNUPNO95149 360 aaKnown RBP5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 IL6RP08887 468 aaPredicted RBP5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 POU2F2P09086 479 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 CLCN2P51788 898 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 SLC44A4Q53GD3 710 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 TEDDM1Q5T9Z0 273 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 Q8N9P0 234 aaPredicted RBP5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 NELL2Q99435 816 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 TTYH3Q9C0H2 523 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 HESX1Q9UBX0 185 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 SPEF1Q9Y4P9 236 aa5.38□□□□□ -1.55
CTHRC1-204ENST00000520880 KRTAP29-1A8MX34 341 aaPredicted RBP5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 TISP43B9A030 160 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 CYP2C18P33260 490 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 ALDH9A1P49189 494 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 PGS1Q32NB8 556 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 TMEM240Q5SV17 173 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 TREML2Q5T2D2 321 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 LCE1AQ5T7P2 110 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 ICE2Q659A1 982 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 ANKRD16Q6P6B7 361 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 SLC29A4Q7RTT9 530 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 FANCBQ8NB91 859 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 PCSK9Q8NBP7 692 aaKnown RBP5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 TBC1D5Q92609 795 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 GTPBP4Q9BZE4 634 aaKnown RBP5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 PNPOQ9NVS9 261 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 DLL3Q9NYJ7 618 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 SERTAD3Q9UJW9 196 aa5.37□□□□□ -1.55
CTHRC1-204ENST00000520880 ITGB6P18564 788 aa5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 HDCP19113 662 aa5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 KELP23276 732 aa5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 EPHB2P29323 1055 aa5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 MPGP29372 298 aa5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 NKX6-1P78426 367 aaPredicted RBP5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 KLF9Q13886 244 aaPredicted RBP5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 PLS1Q14651 629 aa5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 LONRF3Q496Y0 759 aa5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 AARS2Q5JTZ9 985 aaKnown RBP5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 SFRP4Q6FHJ7 346 aaPredicted RBP5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 ZNF366Q8N895 744 aa5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 FAM167AQ96KS9 214 aa5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 SEMA4CQ9C0C4 833 aa5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 SSX2IPQ9Y2D8 614 aa5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 LAMC3Q9Y6N6 1575 aa5.36□□□□□ -1.55
CTHRC1-204ENST00000520880 GOLGA3Q08378 1498 aa5.35□□□□□ -1.55
CTHRC1-204ENST00000520880 H3BUI4 141 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms