RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 CST3P01034 146 aaPredicted RBP20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 GLULP15104 373 aa20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 PCSK1P29120 753 aa20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 BFSP1Q12934 665 aa20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 SNW1Q13573 536 aaKnown RBP20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 ALYREFQ86V81 257 aaKnown RBP20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 OSTM1Q86WC4 334 aa20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 ZNF687Q8N1G0 1237 aa20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 IRF7Q92985 503 aa20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 CLDN23Q96B33 292 aa20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 CEP295NLQ96MC4 621 aa20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 TRMT61BQ9BVS5 477 aaKnown RBP20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 VRTNQ9H8Y1 702 aa20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 COL4A3Q01955 1670 aa20.88■□□□□ 0.93
CCHCR1-230ENST00000513222 NCANO14594 1321 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 TACC1O75410 805 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 RHOBTB3O94955 611 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 KRT19P08727 400 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 GJA1P17302 382 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 WARSP23381 471 aaKnown RBP20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 FZD5Q13467 585 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 VEPH1Q14D04 833 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 NFIL3Q16649 462 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 MGAT5BQ3V5L5 792 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 LMBRD2Q68DH5 695 aaPredicted RBP20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 TMEM150AQ86TG1 271 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 ADGRF2Q8IZF7 708 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 PARD3BQ8TEW8 1205 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 TRMT2BQ96GJ1 504 aaKnown RBP20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 MYRFLQ96LU7 910 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 LPIN3Q9BQK8 851 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 EXOC1Q9NV70 894 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 FAM186AA6NE01 2351 aa20.87■□□□□ 0.93
CCHCR1-230ENST00000513222 F11P03951 625 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 CDC25CP30307 473 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 ATICP31939 592 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 MAGEA9P43362 315 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 MAGEA11P43364 429 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 CYP2J2P51589 502 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 AP3M2P53677 418 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 DPYDQ12882 1025 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 MAMSTRQ6ZN01 415 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 RDH13Q8NBN7 331 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 PLEKHO2Q8TD55 490 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 FNBP1Q96RU3 617 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 SEPT5Q99719 369 aaPredicted RBP20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 XYLT2Q9H1B5 865 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 TASP1Q9H6P5 420 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 ABI2Q9NYB9 513 aaPredicted RBP20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 CDH9Q9ULB4 789 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 TRAF3IP3Q9Y228 551 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 DMDP11532 3685 aa20.86■□□□□ 0.93
CCHCR1-230ENST00000513222 WDR87Q6ZQQ6 2873 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 MAPK13O15264 365 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 NOL4O94818 638 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 RPN1P04843 607 aaKnown RBP20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 TNNI1P19237 187 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 GABRR2P28476 465 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 VIPR2P41587 438 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 RPS9P46781 194 aaKnown RBP20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 RPL10AP62906 217 aaKnown RBP20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 ENPEPQ07075 957 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 KCNB1Q14721 858 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 ANGPT1Q15389 498 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 KRBA2Q6ZNG9 492 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 ARID3BQ8IVW6 561 aaPredicted RBP20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 NOC3LQ8WTT2 800 aaKnown RBP20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 ATOH1Q92858 354 aaPredicted RBP20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 RSPRY1Q96DX4 576 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 FOXQ1Q9C009 403 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 LTB4R2Q9NPC1 389 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 GTF3C4Q9UKN8 822 aa20.85■□□□□ 0.93
CCHCR1-230ENST00000513222 MYBPHLA2RUH7 354 aa20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 HEPACAM2A8MVW5 462 aa20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 CHADO15335 359 aa20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 EXOC3O60645 756 aa20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 CSH1P0DML2 217 aa20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 CSH2P0DML3 217 aa20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 DLATP10515 647 aaKnown RBP20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 NLRP12P59046 1061 aa20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 MAPRE1Q15691 268 aaKnown RBP20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 STXBP5Q5T5C0 1151 aa20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 CCDC127Q96BQ5 260 aa20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 LRRC3BQ96PB8 259 aa20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 ATXN3LQ9H3M9 355 aa20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 BRD9Q9H8M2 597 aa20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 R3HCC1Q9Y3T6 440 aaKnown RBP20.84■□□□□ 0.93
CCHCR1-230ENST00000513222 STK25O00506 426 aa20.83■□□□□ 0.93
CCHCR1-230ENST00000513222 MAN2B1O00754 1011 aa20.83■□□□□ 0.93
CCHCR1-230ENST00000513222 ZNF202O95125 648 aa20.83■□□□□ 0.93
CCHCR1-230ENST00000513222 C4BPAP04003 597 aaKnown RBP20.83■□□□□ 0.93
CCHCR1-230ENST00000513222 DCNP07585 359 aaKnown RBP20.83■□□□□ 0.93
CCHCR1-230ENST00000513222 ACAT1P24752 427 aaKnown RBP20.83■□□□□ 0.93
CCHCR1-230ENST00000513222 CYP2F1P24903 491 aa20.83■□□□□ 0.93
CCHCR1-230ENST00000513222 LMO2P25791 158 aa20.83■□□□□ 0.93
CCHCR1-230ENST00000513222 DDX6P26196 483 aaKnown RBP eCLIP20.83■□□□□ 0.93
CCHCR1-230ENST00000513222 BECN1Q14457 450 aa20.83■□□□□ 0.93
CCHCR1-230ENST00000513222 ARHGAP15Q53QZ3 475 aa20.83■□□□□ 0.93
CCHCR1-230ENST00000513222 VSTM1Q6UX27 236 aa20.83■□□□□ 0.93
CCHCR1-230ENST00000513222 ZNF852Q6ZMS4 543 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms