RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 NR3C2P08235 984 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 KCNA2P16389 499 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 UGT1A5P35504 534 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 PTPN12Q05209 780 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 HIBCHQ6NVY1 386 aaPredicted RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 SMARCD3Q6STE5 483 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 LRRC69Q6ZNQ3 347 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 SFR1Q86XK3 245 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 SPAG16Q8N0X2 631 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 SLC13A1Q9BZW2 595 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 BOLA2Q9H3K6 86 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 CCDC86Q9H6F5 360 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 RBM7Q9Y580 266 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 ZHX2Q9Y6X8 837 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 URADA6NGE7 173 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 CCRL2O00421 344 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 DNAJA2O60884 412 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 FLT3P36888 993 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 PRIM2P49643 509 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 CAMK2GQ13555 558 aaPredicted RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 CDH18Q13634 790 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 DLGAP5Q15398 846 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 DSG4Q86SJ6 1040 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 DDX53Q86TM3 631 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 CLEC4FQ8N1N0 589 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 C16orf58Q96GQ5 468 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 PI4K2AQ9BTU6 479 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 FBXO28Q9NVF7 368 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 GGA3Q9NZ52 723 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 RWDD2AQ9UIY3 292 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 UHRF1BP1Q6BDS2 1440 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 AOX1Q06278 1338 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 TRIM43BA6NCK2 446 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 TRPC5OSA6NMA1 111 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 VWA5AO00534 786 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 HUS1O60921 280 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 GARTP22102 1010 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 SLC26A3P40879 764 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 NAMPTP43490 491 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 ZNHIT3Q15649 155 aaPredicted RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 EFHC2Q5JST6 749 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 FIGNL1Q6PIW4 674 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 TMEM26Q6ZUK4 368 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 SRBD1Q8N5C6 995 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 CCDC33Q8N5R6 958 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 AOPEPQ8N6M6 819 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 RBBP8NLQ8NC74 664 aaPredicted RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 NSUN7Q8NE18 718 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 METTL6Q8TCB7 284 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 UBE2E3Q969T4 207 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 C9orf72Q96LT7 481 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 ENY2Q9NPA8 101 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 TFCP2L1Q9NZI6 479 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 KLHL8Q9P2G9 620 aaPredicted RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 GJA3Q9Y6H8 435 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 MYO18AQ92614 2054 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 MROH7-TTC4A0A0A0MT08 1334 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 MROH7Q68CQ1 1323 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 ZC3H4Q9UPT8 1303 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 ATP5JP18859 108 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 NOS3P29474 1203 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 NOS2P35228 1153 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 PSMC2P35998 433 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 MAGEA2P43356 314 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 CREMQ03060 361 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 GPR162Q16538 588 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 SCARA3Q6AZY7 606 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 ATG14Q6ZNE5 492 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 LPCAT1Q8NF37 534 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 CABLES1Q8TDN4 633 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 HCAR2Q8TDS4 363 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 DNAAF2Q9NVR5 837 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 GTSE1Q9NYZ3 720 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 KDM5AP29375 1690 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 MIF4GDA9UHW6 222 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 DFFAO00273 331 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 RGS14O43566 566 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 SKAP2O75563 359 aaPredicted RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 KLHL2O95198 593 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 RASGRP1O95267 797 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 SERPINB9P50453 376 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 ATP1A2P50993 1020 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 ATP12AP54707 1039 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 MRPS22P82650 360 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 MPP2Q14168 576 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 RRP1BQ14684 758 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 CLCA4Q14CN2 919 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 TRIM16LQ309B1 348 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 C1orf146Q5VVC0 180 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 FAM92BQ6ZTR7 304 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 GALNT7Q86SF2 657 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 LARGE2Q8N3Y3 721 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 ANKRD42Q8N9B4 389 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 ING4Q9UNL4 249 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 SIK3Q9Y2K2 1263 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 GIT1Q9Y2X7 761 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 ARL5AQ9Y689 179 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 NUP160Q12769 1436 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 PGRMC1O00264 195 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 ZNF500O60304 480 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms