RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 LRRC3Q9BY71 257 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 TSPY26PQ9H489 355 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 SLITRK6Q9H5Y7 841 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.87□□□□□ -0.991e-15■■■■■ 67.3
HDAC6-221ENST00000477561 GDE1Q9NZC3 331 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 NXF1Q9UBU9 619 aaKnown RBP8.87□□□□□ -0.99
HDAC6-221ENST00000477561 PCDHB5Q9Y5E4 795 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 DOCK8Q8NF50 2099 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 GABRDO14764 452 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 PI15O43692 258 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 AKAP3O75969 853 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 KIF20AO95235 890 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 C4BPAP04003 597 aaKnown RBP8.86□□□□□ -0.99
HDAC6-221ENST00000477561 HAPLN1P10915 354 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-221ENST00000477561 NPR3P17342 541 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 NR2F2P24468 414 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 CYP2F1P24903 491 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 GABRR2P28476 465 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 VIPR2P41587 438 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 LHX1P48742 406 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 EPHA5P54756 1037 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 TNNC1P63316 161 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 GRM2Q14416 872 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 TAF12Q16514 161 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 NFE2Q16621 373 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-221ENST00000477561 DDR2Q16832 855 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 WDR72Q3MJ13 1102 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 DPH6Q7L8W6 267 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 LIMS2Q7Z4I7 341 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 ITIH5Q86UX2 942 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 SPATA2LQ8IUW3 424 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-221ENST00000477561 SLC9A9Q8IVB4 645 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 GUF1Q8N442 669 aaKnown RBP8.86□□□□□ -0.99
HDAC6-221ENST00000477561 TMEM105Q8N8V8 129 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 C2orf15Q8WU43 125 aaKnown RBP8.86□□□□□ -0.99
HDAC6-221ENST00000477561 PSMG2Q969U7 264 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 SYT15Q9BQS2 421 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 SNX25Q9H3E2 840 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 ATXN3LQ9H3M9 355 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 MMRN2Q9H8L6 949 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 MAGED2Q9UNF1 606 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-221ENST00000477561 TRAF3IP3Q9Y228 551 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 FRMD4BQ9Y2L6 1034 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 ASB3Q9Y575 518 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 NME7Q9Y5B8 376 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 PCDHA5Q9Y5H7 936 aa8.86□□□□□ -0.99
HDAC6-221ENST00000477561 WDFY4Q6ZS81 3184 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 ECI2O75521 394 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 MICAL2O94851 1124 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 SMC2O95347 1197 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 VNN1O95497 513 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 CAVIN2O95810 425 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 TRIM49P0CI25 452 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 TRIM49CP0CI26 452 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 RFX1P22670 979 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 WARSP23381 471 aaKnown RBP8.85□□□□□ -0.99
HDAC6-221ENST00000477561 FCARP24071 287 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 PCSK1P29120 753 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 GNL1P36915 607 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-221ENST00000477561 PRCPP42785 496 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 RAP1GAPP47736 663 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 MRE11P49959 708 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 CDH8P55286 799 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 CLDN10P78369 228 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 CYP4F8P98187 520 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 CYP27A1Q02318 531 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 SMARCB1Q12824 385 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 ADAM9Q13443 819 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 NCOA4Q13772 614 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 VEPH1Q14D04 833 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 ZNF699Q32M78 642 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 C1orf220Q5T0J3 134 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 GPR158Q5T848 1215 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 CWF19L1Q69YN2 538 aaKnown RBP8.85□□□□□ -0.99
HDAC6-221ENST00000477561 ASTLQ6HA08 431 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-221ENST00000477561 SCARA5Q6ZMJ2 495 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 GAREM2Q75VX8 874 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 SCN4BQ8IWT1 228 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 FAM186BQ8IYM0 893 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 LEMD2Q8NC56 503 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 PRSS33Q8NF86 280 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 OR6B3Q8NGW1 331 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 ZSCAN18Q8TBC5 510 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-221ENST00000477561 SMARCD2Q92925 531 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 SMARCE1Q969G3 411 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 MYLPFQ96A32 169 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 ELSPBP1Q96BH3 223 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 FAM122AQ96E09 287 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 ASB16Q96NS5 453 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 PKMYT1Q99640 499 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 XYLT2Q9H1B5 865 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 ZFP14Q9HCL3 533 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 CRTAC1Q9NQ79 661 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 ARHGEF3Q9NR81 526 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 SLC2A4RGQ9NR83 387 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 RMND1Q9NWS8 449 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 HSFX1Q9UBD0 423 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 WNT16Q9UBV4 365 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 CDH9Q9ULB4 789 aa8.85□□□□□ -0.99
HDAC6-221ENST00000477561 NCANO14594 1321 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms