RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 TBC1D7Q9P0N9 293 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 SUCLA2Q9P2R7 463 aaPredicted RBP5.98□□□□□ -1.45
VPS41-211ENST00000466017 IMPACTQ9P2X3 320 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 KLHL3Q9UH77 587 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 GTF2IRD1Q9UHL9 959 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 TBX20Q9UMR3 447 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 CTNND2Q9UQB3 1225 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 MAPK8IP1Q9UQF2 711 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 PCDHB14Q9Y5E9 798 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 SCN10AQ9Y5Y9 1956 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 TMEM265A0A087WTH1 108 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 A0A1W2PQC6 194 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 DENND3A2RUS2 1198 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 TRIM49BA6NDI0 452 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 CCDC169A6NNP5 214 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 KCNJ18B7U540 433 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 H3BS24 57 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 K7ENM7 598 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 ACKR2O00590 384 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 C6orf222P0C671 652 aaPredicted RBP5.97□□□□□ -1.45
VPS41-211ENST00000466017 SMIM10L2AP0DMW4 78 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 SMIM10L2BP0DMW5 78 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 FUT4P22083 530 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 CNGA1P29973 690 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 CCND3P30281 292 aaPredicted RBP5.97□□□□□ -1.45
VPS41-211ENST00000466017 PSMC2P35998 433 aaKnown RBP5.97□□□□□ -1.45
VPS41-211ENST00000466017 PBX1P40424 430 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 COPB1P53618 953 aaKnown RBP5.97□□□□□ -1.45
VPS41-211ENST00000466017 RAD51AP2Q09MP3 1159 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 LAMTOR4Q0VGL1 99 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 PPFIA1Q13136 1202 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 CAPSQ13938 189 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 MPP2Q14168 576 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 KCNJ12Q14500 433 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 MAN2A1Q16706 1144 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 KYAT1Q16773 422 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 KIAA0753Q2KHM9 967 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 ZC2HC1CQ53FD0 456 aaPredicted RBP5.97□□□□□ -1.45
VPS41-211ENST00000466017 SFRP5Q5T4F7 317 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 MAEAQ7L5Y9 396 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 TRIM59Q8IWR1 403 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 ZBTB8OSQ8IWT0 167 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 KIAA0319LQ8IZA0 1049 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 SLC43A3Q8NBI5 491 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 DEPTORQ8TB45 409 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 PRPF31Q8WWY3 499 aaKnown RBP5.97□□□□□ -1.45
VPS41-211ENST00000466017 TMEM143Q96AN5 459 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 HRASLS5Q96KN8 279 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 ERGIC2Q96RQ1 377 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 SH2D3AQ9BRG2 576 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 FGFBP2Q9BYJ0 223 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 EDEM3Q9BZQ6 932 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 TRIM5Q9C035 493 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 INO80BQ9C086 356 aaPredicted RBP5.97□□□□□ -1.45
VPS41-211ENST00000466017 CCDC113Q9H0I3 377 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 XPNPEP3Q9NQH7 507 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 AGPAT3Q9NRZ7 376 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 MAGEC2Q9UBF1 373 aaPredicted RBP5.97□□□□□ -1.45
VPS41-211ENST00000466017 ADAM30Q9UKF2 790 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 OGDHLQ9ULD0 1010 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 DAAM1Q9Y4D1 1078 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 TRIM17Q9Y577 477 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 ARID2Q68CP9 1835 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 ITIH6Q6UXX5 1313 aa5.97□□□□□ -1.45
VPS41-211ENST00000466017 C17orf102A2RUQ5 167 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 GTPBP10A4D1E9 387 aaKnown RBP5.96□□□□□ -1.46
VPS41-211ENST00000466017 SLC22A31A6NKX4 558 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 LGALS16A8MUM7 142 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 GOLGA6L6A8MZA4 724 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 SLC16A4O15374 487 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 P4HA2O15460 535 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 CAND2O75155 1236 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 GPR32O75388 356 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 SERPINC1P01008 464 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 NR3C1P04150 777 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 ASGR1P07306 291 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 TPM2P07951 284 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 MYL3P08590 195 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 EPB41P11171 864 aaKnown RBP5.96□□□□□ -1.46
VPS41-211ENST00000466017 ATP1A3P13637 1013 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 PROZP22891 400 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 PTGS1P23219 599 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 NR2F2P24468 414 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 MARK3P27448 753 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 AXLP30530 894 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 POLR2BP30876 1174 aaKnown RBP5.96□□□□□ -1.46
VPS41-211ENST00000466017 GTF2H1P32780 548 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 DEKP35659 375 aaKnown RBP5.96□□□□□ -1.46
VPS41-211ENST00000466017 GPC3P51654 580 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 BEX3Q00994 111 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 STRN3Q13033 797 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 DRP2Q13474 957 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 PLCL1Q15111 1095 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 KRT31Q15323 416 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 SURF1Q15526 300 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 KCNA10Q16322 511 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 MAPK6Q16659 721 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 VWA3BQ502W6 1294 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 SEZ6Q53EL9 994 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 FIGNQ5HY92 759 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms