RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 CATSPERGQ6ZRH7 1159 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 SPATA31D4Q6ZUB0 917 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 KRT28Q7Z3Y7 464 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 SDR16C5Q8N3Y7 309 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 SLC15A4Q8N697 577 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 PSD4Q8NDX1 1056 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 NSUN7Q8NE18 718 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 FAM46DQ8NEK8 389 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 CHST13Q8NET6 341 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 CYP2W1Q8TAV3 490 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 CPT1CQ8TCG5 803 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 CACTINQ8WUQ7 758 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 ZNF503Q96F45 646 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 TNIP3Q96KP6 325 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 PHACTR3Q96KR7 559 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 SNX22Q96L94 193 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 MOGAT1Q96PD6 335 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 TRIB1Q96RU8 372 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 OSBPL9Q96SU4 736 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 CDK5RAP1Q96SZ6 601 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 MPHOSPH6Q99547 160 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 SMOQ99835 787 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 ZSWIM1Q9BR11 485 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 WDR12Q9GZL7 423 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 SMOC2Q9H3U7 446 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 WDR26Q9H7D7 661 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 AKIP1Q9NQ31 210 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 SERHLQ9NQF3 203 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 TRMT13Q9NUP7 481 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 GPRC5BQ9NZH0 403 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 TRPM5Q9NZQ8 1165 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 DKK4Q9UBT3 224 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 EIF2B4Q9UI10 523 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 CORO2BQ9UQ03 480 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 A0A087WZ62 844 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 M0QYG6 137 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 IFRD1O00458 451 aaPredicted RBP2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 APOL1O14791 398 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 CCP110O43303 1012 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 TPD52L2O43399 206 aaKnown RBP2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 NCR1O76036 304 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 PARP1P09874 1014 aaKnown RBP2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 ATXN1LP0C7T5 689 aaKnown RBP2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 GATA3P23771 443 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 GDF5P43026 501 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 GCLCP48506 637 aaPredicted RBP2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 DGKEP52429 567 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 VAV2P52735 878 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 RPS7P62081 194 aaKnown RBP2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 MC2RQ01718 297 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 FSTL1Q12841 308 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 CRHR2Q13324 411 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 IQCB1Q15051 598 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 BRD3Q15059 726 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 MPEG1Q2M385 716 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 ZIK1Q3SY52 487 aaPredicted RBP2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 SLC44A4Q53GD3 710 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 USP39Q53GS9 565 aaKnown RBP2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 MIIPQ5JXC2 388 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 SPDYAQ5MJ70 313 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 FAM83BQ5T0W9 1011 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 KLHDC7AQ5VTJ3 777 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 FNDC7Q5VTL7 733 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 MICALCLQ6ZW33 695 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 UNC13DQ70J99 1090 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 CLNKQ7Z7G1 428 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 C1orf210Q8IVY1 113 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 ARHGEF19Q8IW93 802 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 SMC5Q8IY18 1101 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 ADGRG5Q8IZF4 528 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 ZNF276Q8N554 614 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 SPSB4Q96A44 273 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 SLC46A1Q96NT5 459 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 NELL2Q99435 816 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 ARPC5LQ9BPX5 153 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 PTDSS2Q9BVG9 487 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 SELENOOQ9BVL4 669 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 AMBRA1Q9C0C7 1298 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 MS4A7Q9GZW8 240 aaPredicted RBP2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 UNKLQ9H9P5 680 aaKnown RBP2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 GALNT9Q9HCQ5 603 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 PNPLA8Q9NP80 782 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 PLCB1Q9NQ66 1216 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 PARPBPQ9NWS1 579 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 DNMT3BQ9UBC3 853 aaKnown RBP2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 FZD1Q9UP38 647 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 DMTF1Q9Y222 760 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 CDYLQ9Y232 598 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 SNX13Q9Y5W8 968 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 RAD54BQ9Y620 910 aa2.34□□□□□ -2.03
NUCKS1-202ENST00000464938 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 CENPVL1A0A0U1RR11 272 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 LOC102723971A0A1B0GUV8 181 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 PROM1O43490 865 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 LPXNO60711 386 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 FAM20BO75063 409 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 VPS4BO75351 444 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 EIF3JO75822 258 aaKnown RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 SPDEFO95238 335 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 NDUFA10O95299 355 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms