RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 SPATS2LQ9NUQ6 558 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 GABBR1Q9UBS5 961 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 SYNPO2Q9UMS6 1093 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 SIGLEC16A6NMB1 481 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 WDR64B1ANS9 1081 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 ACADSP16219 412 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 NIPA1Q7RTP0 329 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 USP37Q86T82 979 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 SAMD3Q8N6K7 520 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 CPT1BQ92523 772 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 RBM41Q96IZ5 413 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 ANKRD27Q96NW4 1050 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 TIPINQ9BVW5 301 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 DCLRE1BQ9H816 532 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 KCNK13Q9HB14 408 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 PARVAQ9NVD7 372 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 SLC24A2Q9UI40 661 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 SCINQ9Y6U3 715 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 CNTNAP1P78357 1384 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 TMEM191CA6NGB0 347 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 NVLO15381 856 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 GSC2O15499 205 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 HAUS5O94927 633 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 ZWINTO95229 277 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 ITGBL1O95965 494 aaPredicted RBP12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 TMEM191BP0C7N4 346 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 CETN2P41208 172 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 CPA2P48052 419 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 FKBP1AP62942 108 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 MXRA7P84157 204 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 SEPT7Q16181 437 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 ZNF394Q53GI3 561 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 CYP4A22Q5TCH4 519 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 RNF220Q5VTB9 566 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 C3orf62Q6ZUJ4 267 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 FBXO36Q8NEA4 188 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 OR5B17Q8NGF7 314 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 PYROXD1Q8WU10 500 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 DCAKDQ8WVC6 231 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 FAM136AQ96C01 138 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 MANSC1Q9H8J5 431 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 ANKEF1Q9NU02 776 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 DLGAP2Q9P1A6 1054 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 ARMCX1Q9P291 453 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 IP6K2Q9UHH9 426 aa12.34□□□□□ -0.43
PDZRN3-203ENST00000462146 TMEM63AO94886 807 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 TROVE2P10155 538 aaKnown RBP eCLIP12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 CDKN2BP42772 138 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 BPIFB4P59827 614 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 CCDC6Q16204 474 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 C11orf91Q3C1V1 193 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 KCNT1Q5JUK3 1230 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 SNX30Q5VWJ9 437 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 DRICH1Q6PGQ1 229 aaPredicted RBP12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 BANPQ8N9N5 519 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 NTPCRQ9BSD7 190 aaKnown RBP12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 BTBD10Q9BSF8 475 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 TMEM120AQ9BXJ8 343 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 DEFB129Q9H1M3 183 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 GINM1Q9NU53 330 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 SHOC2Q9UQ13 582 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 E5RJQ4 531 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 TBX10O75333 385 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 GARTP22102 1010 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 SP100P23497 879 aaPredicted RBP12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 LIG4P49917 911 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 OTUD4Q01804 1114 aaKnown RBP12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 C1QBPQ07021 282 aaKnown RBP12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 KLC1Q07866 573 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 TSNAXIP1Q2TAA8 658 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 ADGRD1Q6QNK2 874 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 CEP128Q6ZU80 1094 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 IGDCC3Q8IVU1 814 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 ZNF606Q8WXB4 792 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 SCG3Q8WXD2 468 aaKnown RBP12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 TSSK1BQ9BXA7 367 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 ZNF341Q9BYN7 854 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 PCDH9Q9HC56 1237 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 SAR1AQ9NR31 198 aa12.33□□□□□ -0.44
PDZRN3-203ENST00000462146 CAPN9O14815 690 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 EXTL3O43909 919 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 STBD1O95210 358 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 EDN1P05305 212 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 MMP10P09238 476 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 GNAT1P11488 350 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 BGNP21810 368 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 MMP8P22894 467 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 BRD2P25440 801 aaKnown RBP12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 MRPS35P82673 323 aaKnown RBP12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 RCN2Q14257 317 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 PSMD6Q15008 389 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 BBS9Q3SYG4 887 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 TFDP3Q5H9I0 405 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 FBXO27Q8NI29 283 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 ACTL9Q8TC94 416 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 TTC17Q96AE7 1141 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 SERAC1Q96JX3 654 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 FAM111AQ96PZ2 611 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 POLR3FQ9H1D9 316 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms