RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 SLC9A9Q8IVB4 645 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 KBTBD7Q8WVZ9 684 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 ZNF516Q92618 1163 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 IRF7Q92985 503 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 RSPRY1Q96DX4 576 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 FNBP1Q96RU3 617 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 NELL2Q99435 816 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 KCTD10Q9H3F6 313 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 EXOC1Q9NV70 894 aa20.81■□□□□ 0.92
USP40-207ENST00000450940 NCANO14594 1321 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 TICRRQ7Z2Z1 1910 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 CACNA1IQ9P0X4 2223 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 CST3P01034 146 aaPredicted RBP20.8■□□□□ 0.92
USP40-207ENST00000450940 DCNP07585 359 aaKnown RBP20.8■□□□□ 0.92
USP40-207ENST00000450940 DLATP10515 647 aaKnown RBP20.8■□□□□ 0.92
USP40-207ENST00000450940 HMGA1P17096 107 aaKnown RBP20.8■□□□□ 0.92
USP40-207ENST00000450940 TNNI1P19237 187 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 ACAT1P24752 427 aaKnown RBP20.8■□□□□ 0.92
USP40-207ENST00000450940 CDC25CP30307 473 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 CDR1P51861 262 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 CLDN10P78369 228 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 GRM2Q14416 872 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 CFAP221Q4G0U5 840 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 STXBP5Q5T5C0 1151 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 FAM171BQ6P995 826 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 ARID3BQ8IVW6 561 aaPredicted RBP20.8■□□□□ 0.92
USP40-207ENST00000450940 FAM200AQ8TCP9 573 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 CCDC127Q96BQ5 260 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 ATXN3LQ9H3M9 355 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 SLITRK6Q9H5Y7 841 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 BRD9Q9H8M2 597 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 LTB4R2Q9NPC1 389 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 ZMYM5Q9UJ78 669 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 GTF3C4Q9UKN8 822 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 PTPRDP23468 1912 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 ZFHX2Q9C0A1 2572 aaPredicted RBP20.8■□□□□ 0.92
USP40-207ENST00000450940 F5P12259 2224 aa20.8■□□□□ 0.92
USP40-207ENST00000450940 GREB1Q4ZG55 1949 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 HEPACAM2A8MVW5 462 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 ARNTLO00327 626 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 PDXKO00764 312 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 EXOC3O60645 756 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 STAU1O95793 577 aaKnown RBP20.79■□□□□ 0.92
USP40-207ENST00000450940 WARSP23381 471 aaKnown RBP20.79■□□□□ 0.92
USP40-207ENST00000450940 MLLT6P55198 1093 aaPredicted RBP20.79■□□□□ 0.92
USP40-207ENST00000450940 FCHO2Q0JRZ9 810 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 PLEKHO2Q8TD55 490 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 GIPC2Q8TF65 315 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 FUBP3Q96I24 572 aaKnown RBP eCLIP20.79■□□□□ 0.92
USP40-207ENST00000450940 PI4K2AQ9BTU6 479 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 TASP1Q9H6P5 420 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 HEBP1Q9NRV9 189 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 OBP2AQ9NY56 170 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 MTF2Q9Y483 593 aaPredicted RBP20.79■□□□□ 0.92
USP40-207ENST00000450940 USP34Q70CQ2 3546 aa20.79■□□□□ 0.92
USP40-207ENST00000450940 PATJQ8NI35 1801 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 MYBPHLA2RUH7 354 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 FAM170BA6NMN3 283 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 SOBPA7XYQ1 873 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 LRRN2O75325 713 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 F11P03951 625 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 RPN1P04843 607 aaKnown RBP20.78■□□□□ 0.92
USP40-207ENST00000450940 CYP2F1P24903 491 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 GDI1P31150 447 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 MAGEA9P43362 315 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 RPL10AP62906 217 aaKnown RBP20.78■□□□□ 0.92
USP40-207ENST00000450940 ARHGAP15Q53QZ3 475 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 GPR158Q5T848 1215 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 TPRG1Q6ZUI0 275 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 TMEM150AQ86TG1 271 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 PARD3BQ8TEW8 1205 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 CLDN23Q96B33 292 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 CDH9Q9ULB4 789 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 FANCMQ8IYD8 2048 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 VPS13AQ96RL7 3174 aa20.78■□□□□ 0.92
USP40-207ENST00000450940 KIF26AQ9ULI4 1882 aaPredicted RBP20.77■□□□□ 0.92
USP40-207ENST00000450940 ZNF263O14978 683 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 CHADO15335 359 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 HCRTO43612 131 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 TACC1O75410 805 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 RHOBTB3O94955 611 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 CSH1P0DML2 217 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 CSH2P0DML3 217 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 CD72P21854 359 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 LMO2P25791 158 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 MAGEA11P43364 429 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 NLRP12P59046 1061 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 DPYDQ12882 1025 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 FZD5Q13467 585 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 TAF12Q16514 161 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 ZNF852Q6ZMS4 543 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 KRBA2Q6ZNG9 492 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 C1orf210Q8IVY1 113 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 ZNF687Q8N1G0 1237 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 FSIP1Q8NA03 581 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 MYRFLQ96LU7 910 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 LRRC3BQ96PB8 259 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 XYLT2Q9H1B5 865 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 GOLPH3LQ9H4A5 285 aa20.77■□□□□ 0.92
USP40-207ENST00000450940 ZNF638Q14966 1978 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms