RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 ADRM1Q16186 407 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 CYP2A13Q16696 494 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 TMEM95Q3KNT9 176 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 C3orf36Q3SXR2 165 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 DRC7Q8IY82 874 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 PAF1Q8N7H5 531 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 HDAC10Q969S8 669 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 PTCD3Q96EY7 689 aaKnown RBP4.99□□□□□ -1.61
VPS29-202ENST00000447578 BOD1Q96IK1 185 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 AIFM2Q9BRQ8 373 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 SELENOOQ9BVL4 669 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 KLK15Q9H2R5 256 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 IL17RBQ9NRM6 502 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 TMEM74BQ9NUR3 256 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 SLC23A1Q9UHI7 598 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 PNMA2Q9UL42 364 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 KIF21AQ7Z4S6 1674 aa4.99□□□□□ -1.61
VPS29-202ENST00000447578 MAPKBP1O60336 1514 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 NBNO60934 754 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 ZFPL1O95159 310 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 RPLP2P05387 115 aaKnown RBP4.98□□□□□ -1.61
VPS29-202ENST00000447578 WASP42768 502 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 MCAMP43121 646 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 AGFG1P52594 562 aaKnown RBP4.98□□□□□ -1.61
VPS29-202ENST00000447578 CACNA2D1P54289 1103 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 BTKQ06187 659 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 PPP3CAQ08209 521 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 FOXF2Q12947 444 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 IL10RAQ13651 578 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 KRT72Q14CN4 511 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 ZNF529Q6P280 563 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 UBE3BQ7Z3V4 1068 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 DPP9Q86TI2 863 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 ZNF354CQ86Y25 554 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 CPXCR1Q8N123 301 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 KLHDC4Q8TBB5 520 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 ACTRT2Q8TDY3 377 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 POF1BQ8WVV4 589 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 LRTOMTQ8WZ04 291 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 PDLIM2Q96JY6 352 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 SGCZQ96LD1 299 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 SCLT1Q96NL6 688 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 SENP6Q9GZR1 1112 aaPredicted RBP4.98□□□□□ -1.61
VPS29-202ENST00000447578 GREM2Q9H772 168 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 UNKLQ9H9P5 680 aaKnown RBP4.98□□□□□ -1.61
VPS29-202ENST00000447578 TRMT13Q9NUP7 481 aaKnown RBP4.98□□□□□ -1.61
VPS29-202ENST00000447578 LRIT1Q9P2V4 623 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 SCOCQ9UIL1 159 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.98□□□□□ -1.61
VPS29-202ENST00000447578 SAMD9Q5K651 1589 aa4.98□□□□□ -1.61
VPS29-202ENST00000447578 ARHGEF17Q96PE2 2063 aaPredicted RBP4.98□□□□□ -1.61
VPS29-202ENST00000447578 FGD6Q6ZV73 1430 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 TARBP1Q13395 1621 aaKnown RBP4.97□□□□□ -1.61
VPS29-202ENST00000447578 COL3A1P02461 1466 aaPredicted RBP4.97□□□□□ -1.61
VPS29-202ENST00000447578 GRIN2BQ13224 1484 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 PIP5K1CO60331 668 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 FTLP02792 175 aaPredicted RBP4.97□□□□□ -1.61
VPS29-202ENST00000447578 IL2RBP14784 551 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 GUCY1A2P33402 732 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 PIK3CBP42338 1070 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 TM4SF4P48230 202 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 GPSM2P81274 684 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 NHLH1Q02575 133 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 NOMO1Q15155 1222 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 EPHA10Q5JZY3 1008 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 THEMIS2Q5TEJ8 643 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 PPP4R3AQ6IN85 833 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 FAM180AQ6UWF9 173 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 MIGA2Q7L4E1 593 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 MAEAQ7L5Y9 396 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 KRT78Q8N1N4 520 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 DEPTORQ8TB45 409 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 HOXB13Q92826 284 aaPredicted RBP4.97□□□□□ -1.61
VPS29-202ENST00000447578 MARS2Q96GW9 593 aaKnown RBP4.97□□□□□ -1.61
VPS29-202ENST00000447578 CDK5RAP3Q96JB5 506 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 SIN3AQ96ST3 1273 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 ARFGAP3Q9NP61 516 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 ASB6Q9NWX5 421 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 MOCS1Q9NZB8 636 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 LUZP4Q9P127 313 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 KCNE5Q9UJ90 142 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 AJAP1Q9UKB5 411 aaPredicted RBP4.97□□□□□ -1.61
VPS29-202ENST00000447578 TPCN1Q9ULQ1 816 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 STXBP5LQ9Y2K9 1186 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 LRCH1Q9Y2L9 728 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 MTO1Q9Y2Z2 717 aaKnown RBP4.97□□□□□ -1.61
VPS29-202ENST00000447578 PCDHA13Q9Y5I0 950 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 NR2E3Q9Y5X4 410 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 ACTL7AQ9Y615 435 aa4.97□□□□□ -1.61
VPS29-202ENST00000447578 CFAP20Q9Y6A4 193 aaKnown RBP4.97□□□□□ -1.61
VPS29-202ENST00000447578 MORC2Q9Y6X9 1032 aaPredicted RBP4.97□□□□□ -1.61
VPS29-202ENST00000447578 NCOA2Q15596 1464 aa4.96□□□□□ -1.62
VPS29-202ENST00000447578 A0A088AWK7 358 aa4.96□□□□□ -1.62
VPS29-202ENST00000447578 RHPN2P1A8MT19 583 aa4.96□□□□□ -1.62
VPS29-202ENST00000447578 PCSK1P29120 753 aa4.96□□□□□ -1.62
VPS29-202ENST00000447578 ABCG1P45844 678 aa4.96□□□□□ -1.62
VPS29-202ENST00000447578 PRIM2P49643 509 aa4.96□□□□□ -1.62
VPS29-202ENST00000447578 MAP2K6P52564 334 aa4.96□□□□□ -1.62
VPS29-202ENST00000447578 DSC2Q02487 901 aa4.96□□□□□ -1.62
VPS29-202ENST00000447578 POU5F1BQ06416 359 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms