RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 ELOVL4Q9GZR5 314 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 TUT1Q9H6E5 874 aaKnown RBP11.01□□□□□ -0.65
CPNE1-218ENST00000439806 METTL5Q9NRN9 209 aaKnown RBP11.01□□□□□ -0.65
CPNE1-218ENST00000439806 MORF4L1Q9UBU8 362 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 ITGA11Q9UKX5 1188 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 AGAP1Q9UPQ3 857 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 PDCD11Q14690 1871 aaKnown RBP11.01□□□□□ -0.65
CPNE1-218ENST00000439806 hCG_1818297A0A087WSY0 165 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 C11orf97A0A1B0GVM6 126 aaPredicted RBP11□□□□□ -0.65
CPNE1-218ENST00000439806 TSPAN1O60635 241 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 CILPO75339 1184 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 KIAA0754O94854 1291 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 ACSL3O95573 720 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 SNAI1O95863 264 aaPredicted RBP11□□□□□ -0.65
CPNE1-218ENST00000439806 FAM107AO95990 144 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 MMP3P08254 477 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 KRT7P08729 469 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 TCF4P15884 667 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 IVDP26440 423 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 SLCO1A2P46721 670 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 SEC24CP53992 1094 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 GSCP56915 257 aaPredicted RBP11□□□□□ -0.65
CPNE1-218ENST00000439806 ORC1Q13415 861 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 ZNF268Q14587 947 aaPredicted RBP11□□□□□ -0.65
CPNE1-218ENST00000439806 SLC10A6Q3KNW5 377 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 TFDP3Q5H9I0 405 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 DRICH1Q6PGQ1 229 aaPredicted RBP11□□□□□ -0.65
CPNE1-218ENST00000439806 TAOK1Q7L7X3 1001 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 GPR142Q7Z601 462 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 ZNF410Q86VK4 478 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 JOSD2Q8TAC2 188 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 KIF12Q96FN5 646 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 HPDLQ96IR7 371 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 HEXIM2Q96MH2 286 aaKnown RBP11□□□□□ -0.65
CPNE1-218ENST00000439806 CCT8L2Q96SF2 557 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 PARK7Q99497 189 aaKnown RBP11□□□□□ -0.65
CPNE1-218ENST00000439806 C16orf70Q9BSU1 422 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 DDX23Q9BUQ8 820 aaKnown RBP11□□□□□ -0.65
CPNE1-218ENST00000439806 KATNBL1Q9H079 304 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 MIS12Q9H081 205 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 VRTNQ9H8Y1 702 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 ZWILCHQ9H900 591 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 LRRC4CQ9HCJ2 640 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 DNAJC17Q9NVM6 304 aaKnown RBP11□□□□□ -0.65
CPNE1-218ENST00000439806 DPP3Q9NY33 737 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 ZNF148Q9UQR1 794 aa11□□□□□ -0.65
CPNE1-218ENST00000439806 DRG1Q9Y295 367 aaKnown RBP11□□□□□ -0.65
CPNE1-218ENST00000439806 RRN3P2A6NIE6 340 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 DCDC2CA8MYV0 355 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 TULP2O00295 520 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 DNALI1O14645 258 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-218ENST00000439806 NPTXRO95502 500 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 TTC4O95801 387 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 ERBB2P04626 1255 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 CHN1P15882 459 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 SMPD1P17405 629 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 KLRC2P26717 231 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 RDXP35241 583 aaKnown RBP10.99□□□□□ -0.65
CPNE1-218ENST00000439806 GRM5P41594 1212 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 CORO7P57737 925 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 PPARDQ03181 441 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 PDE4CQ08493 712 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 AUHQ13825 339 aaKnown RBP10.99□□□□□ -0.65
CPNE1-218ENST00000439806 DGKDQ16760 1214 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 P3H1Q32P28 736 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 DUSP28Q4G0W2 176 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 UBAP2Q5T6F2 1119 aaKnown RBP10.99□□□□□ -0.65
CPNE1-218ENST00000439806 IQSEC1Q6DN90 963 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 ILDR2Q71H61 639 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 DPH6Q7L8W6 267 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 POLNQ7Z5Q5 900 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 ANKS1BQ7Z6G8 1248 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 PLEKHH3Q7Z736 793 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 XYLT1Q86Y38 959 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 C10orf67Q8IYJ2 551 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 TTC13Q8NBP0 860 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 FNIP1Q8TF40 1166 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 BRI3BPQ8WY22 251 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 RAPGEF5Q92565 580 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 CENPTQ96BT3 561 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 ACSF2Q96CM8 615 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-218ENST00000439806 HAUS1Q96CS2 278 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 MAML3Q96JK9 1138 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 SERPINB12Q96P63 405 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 XPO6Q96QU8 1125 aaKnown RBP10.99□□□□□ -0.65
CPNE1-218ENST00000439806 TWNKQ96RR1 684 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 CCDC77Q9BR77 488 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 GCOM2Q9BZD3 368 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-218ENST00000439806 ABHD16BQ9H3Z7 469 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 AAASQ9NRG9 546 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 ASNSD1Q9NWL6 643 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 SLC5A4Q9NY91 659 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 NINJ2Q9NZG7 142 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 DNPEPQ9ULA0 475 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.99□□□□□ -0.652e-6■■■■■ 55.4
CPNE1-218ENST00000439806 NEU2Q9Y3R4 380 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 C2CD2Q9Y426 696 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 FAM169AQ9Y6X4 670 aa10.99□□□□□ -0.65
CPNE1-218ENST00000439806 SGK1O00141 431 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms