RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 CNPY3Q9BT09 278 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 COL1A1P02452 1464 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-208ENST00000430669 ZNF135P52742 658 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-208ENST00000430669 PDCLQ13371 301 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 ZNF235Q14590 738 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 TBCCQ15814 346 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 DCAF6Q58WW2 860 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 CELF3Q5SZQ8 465 aaKnown RBP12.07□□□□□ -0.48
PTCH1-208ENST00000430669 TBC1D1Q86TI0 1168 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-208ENST00000430669 ATP6V1E2Q96A05 226 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 ARHGAP20Q9P2F6 1191 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 USP18Q9UMW8 372 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 EIF3HO15372 352 aaKnown RBP eCLIP12.07□□□□□ -0.48
PTCH1-208ENST00000430669 LYPLA2O95372 231 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 TNFRSF8P28908 595 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 ADORA2AP29274 412 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 PRKCIP41743 596 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 TTC17Q96AE7 1141 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 MTBPQ96DY7 904 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 DDX27Q96GQ7 796 aaKnown RBP12.07□□□□□ -0.48
PTCH1-208ENST00000430669 RAB6BQ9NRW1 208 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 ORC6Q9Y5N6 252 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 POLBP06746 335 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 PGK2P07205 417 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 H2AFXP16104 143 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-208ENST00000430669 CYP2W1Q8TAV3 490 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 SPATA31C2B4DYI2 1134 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 SNX2O60749 519 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 THP07101 528 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 SSTR3P32745 418 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-208ENST00000430669 KPNA1P52294 538 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-208ENST00000430669 PTENP60484 403 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 ADGRF2Q8IZF7 708 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 KANSL3Q9P2N6 904 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 NRCAMQ92823 1304 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 SMIM24O75264 130 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 C1orf131Q8NDD1 294 aaKnown RBP12.07□□□□□ -0.48
PTCH1-208ENST00000430669 DRC3Q9H069 523 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 AAASQ9NRG9 546 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 ZFP69BQ9UJL9 534 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 SLX4Q8IY92 1834 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 NCKAP1LP55160 1127 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 PRAMEP78395 509 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 JADE1Q6IE81 842 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 GJB7Q6PEY0 223 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 SV2AQ7L0J3 742 aa12.07□□□□□ -0.48
PTCH1-208ENST00000430669 PPM1NQ8N819 430 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 DNAJC19Q96DA6 116 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 ZNF668Q96K58 619 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 ZC3H7BQ9UGR2 993 aaKnown RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 KLRC4O43908 158 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 PDGFRBP09619 1106 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 BIRC2Q13490 618 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 ABRAQ8N0Z2 381 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 C4orf32Q8N8J7 132 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 PABPC3Q9H361 631 aaKnown RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 VPS9D1Q9Y2B5 631 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 SIK3Q9Y2K2 1263 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 GOLGA4Q13439 2230 aaKnown RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 APOA4P06727 396 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 CNTFP26441 200 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 TMEM62Q0P6H9 643 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 NUDT18Q6ZVK8 323 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 NUDCD3Q8IVD9 361 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 KIAA1551Q9HCM1 1747 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 TIGD7Q6NT04 549 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 BRSK2Q8IWQ3 736 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 SLITRK1Q96PX8 696 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 TRABDQ9H4I3 376 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 DNAJC17Q9NVM6 304 aaKnown RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 LSM7Q9UK45 103 aaKnown RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 ZNF286BP0CG31 522 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 PPARDQ03181 441 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 SLC7A14Q8TBB6 771 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 ELAC2Q9BQ52 826 aaKnown RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 BRD8Q9H0E9 1235 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 MTIF3Q9H2K0 278 aaKnown RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 EML1O00423 815 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 DDX5P17844 614 aaKnown RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 CYP2B6P20813 491 aa12.06□□□□□ -0.48
PTCH1-208ENST00000430669 CLK2P49760 499 aaKnown RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 MRPS25P82663 173 aaKnown RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 A1CFQ9NQ94 594 aaKnown RBP12.06□□□□□ -0.48
PTCH1-208ENST00000430669 IGKV6D-41A0A0C4DH26 115 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 LRRIQ3A6PVS8 624 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-208ENST00000430669 E5RI56 91 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 AP5Z1O43299 807 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 PTGER2P43116 358 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 BST2Q10589 180 aaKnown RBP12.05□□□□□ -0.48
PTCH1-208ENST00000430669 LY6KQ17RY6 165 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 HOMEZQ8IX15 550 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 COLEC11Q9BWP8 271 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 PCDHGC5Q9Y5F6 944 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 PPP1R37O75864 691 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 HMGCRP04035 888 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 NCF2P19878 526 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-208ENST00000430669 RAD51Q06609 339 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 FAM133BQ5BKY9 247 aaKnown RBP12.05□□□□□ -0.48
PTCH1-208ENST00000430669 C12orf56Q8IXR9 622 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 MYO10Q9HD67 2058 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms