RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 GPS1Q13098 491 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 SPRED3Q2MJR0 410 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 WDR78Q5VTH9 848 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 TMEM192Q8IY95 271 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 RIBC1Q8N443 379 aaPredicted RBP17.75■□□□□ 0.43
NUP50-203ENST00000407019 ANKRD42Q8N9B4 389 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 FAXDC2Q96IV6 333 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 ELAC2Q9BQ52 826 aaKnown RBP17.75■□□□□ 0.43
NUP50-203ENST00000407019 NFKBIZQ9BYH8 718 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 EFCC1Q9HA90 598 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 SAYSD1Q9NPB0 183 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 PRMT7Q9NVM4 692 aaPredicted RBP17.75■□□□□ 0.43
NUP50-203ENST00000407019 NAALADL1Q9UQQ1 740 aa17.75■□□□□ 0.43
NUP50-203ENST00000407019 C22orf31O95567 290 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 CETPP11597 493 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 ETS1P14921 441 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 RAD23BP54727 409 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 TTLL4Q14679 1199 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 MORF4L2Q15014 288 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 WDR72Q3MJ13 1102 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 CYP4F22Q6NT55 531 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 CCDC125Q86Z20 511 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 CYP4X1Q8N118 509 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 C1orf127Q8N9H9 656 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 JOSD2Q8TAC2 188 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 FNIP1Q8TF40 1166 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 TTC25Q96NG3 672 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 PCDH9Q9HC56 1237 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 CYTH4Q9UIA0 394 aa17.74■□□□□ 0.43
NUP50-203ENST00000407019 CCT8L1PA6NM43 557 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 GPR25O00155 361 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 DNM1LO00429 736 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 KRT7P08729 469 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 PECAM1P16284 738 aaPredicted RBP17.73■□□□□ 0.43
NUP50-203ENST00000407019 HNRNPH1P31943 449 aaKnown RBP17.73■□□□□ 0.43
NUP50-203ENST00000407019 PHKA2P46019 1235 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 PSMC1P62191 440 aaKnown RBP17.73■□□□□ 0.43
NUP50-203ENST00000407019 SLC25A11Q02978 314 aaKnown RBP17.73■□□□□ 0.43
NUP50-203ENST00000407019 PPIL2Q13356 520 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 HADHQ16836 314 aaKnown RBP17.73■□□□□ 0.43
NUP50-203ENST00000407019 TMEM63BQ5T3F8 832 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 TAX1BP1Q86VP1 789 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 SDCBP2Q9H190 292 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 MROH8Q9H579 483 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 ZWILCHQ9H900 591 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 PDGFCQ9NRA1 345 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 ERAP1Q9NZ08 941 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 WDR35Q9P2L0 1181 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 TJP2Q9UDY2 1190 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 TBK1Q9UHD2 729 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 ACTL7BQ9Y614 415 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 ANK1P16157 1881 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 C3orf70A6NLC5 250 aaPredicted RBP17.73■□□□□ 0.43
NUP50-203ENST00000407019 LACTBL1A8MY62 500 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 FOXO6A8MYZ6 492 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 SGK1O00141 431 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 LRCH4O75427 683 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 IQCF3P0C7M6 154 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 CDH8P55286 799 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 GSCP56915 257 aaPredicted RBP17.73■□□□□ 0.43
NUP50-203ENST00000407019 PLCB3Q01970 1234 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 TNFAIP2Q03169 654 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 SLC35B2Q8TB61 432 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 SYNCQ9H7C4 482 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 EURLQ9NYK6 297 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 SHOC2Q9UQ13 582 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 EFR3BQ9Y2G0 817 aa17.73■□□□□ 0.43
NUP50-203ENST00000407019 LOC102724159A0A0B4J2E5 919 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 ITGB3P05106 788 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 STAG3L1P0CL83 205 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 MCF2P10911 925 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 SCTRP47872 440 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 IGBP1P78318 339 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 TTLL12Q14166 644 aaPredicted RBP17.72■□□□□ 0.43
NUP50-203ENST00000407019 PWP2Q15269 919 aaKnown RBP17.72■□□□□ 0.43
NUP50-203ENST00000407019 FAM187BQ17R55 369 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 SMTNL2Q2TAL5 461 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 ZNF484Q5JVG2 852 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 RNASEH2BQ5TBB1 312 aaKnown RBP17.72■□□□□ 0.43
NUP50-203ENST00000407019 JADE1Q6IE81 842 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 MOB2Q70IA6 237 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 XYLT1Q86Y38 959 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 SRRM1Q8IYB3 904 aaKnown RBP17.72■□□□□ 0.43
NUP50-203ENST00000407019 SLC4A11Q8NBS3 891 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 CPXM1Q96SM3 734 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 TMEM121Q9BTD3 319 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 FRMD8P1Q9BZ68 369 aaPredicted RBP17.72■□□□□ 0.43
NUP50-203ENST00000407019 RNPEPQ9H4A4 650 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 SMYD3Q9H7B4 428 aa17.72■□□□□ 0.43
NUP50-203ENST00000407019 METTL5Q9NRN9 209 aaKnown RBP17.72■□□□□ 0.43
NUP50-203ENST00000407019 EXOC1LA0A1B0GW35 172 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 TCP11X1B4DZS4 312 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 ATP2C2O75185 946 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 PTPN11Q06124 597 aaPredicted RBP17.71■□□□□ 0.43
NUP50-203ENST00000407019 ORC1Q13415 861 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 MOGSQ13724 837 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 TMED2Q15363 201 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 ARFGAP1Q8N6T3 406 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 CKAP2Q8WWK9 683 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 IFT122Q9HBG6 1241 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms