RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 RRN3P2A6NIE6 340 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 PCDH17O14917 1159 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 CCP110O43303 1012 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 RRP9O43818 475 aaKnown RBP5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 TSPAN15O95858 294 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 PECAM1P16284 738 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 GNAT2P19087 354 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 GCSHP23434 173 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 MST1P26927 711 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 PTDSS1P48651 473 aaKnown RBP5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 EPHB4P54760 987 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 KCNA10Q16322 511 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 TIGD6Q17RP2 521 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 MFSD5Q6N075 450 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 USP17L6PQ6QN14 398 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 MOGAT3Q86VF5 341 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 CCDC150Q8NCX0 1101 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 NSUN7Q8NE18 718 aaKnown RBP5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 MDGA1Q8NFP4 955 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 OTUD7AQ8TE49 926 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 NUP133Q8WUM0 1156 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 ST8SIA2Q92186 375 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 MARS2Q96GW9 593 aaKnown RBP5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 MPP4Q96JB8 637 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 PHACTR3Q96KR7 559 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 PPP1R9BQ96SB3 815 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 SENP7Q9BQF6 1050 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 TTYH3Q9C0H2 523 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 NELFAQ9H3P2 528 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 VPS45Q9NRW7 570 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 GGA3Q9NZ52 723 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 DNMT3BQ9UBC3 853 aaKnown RBP5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 HSFX1Q9UBD0 423 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 HDAC5Q9UQL6 1122 aa5.89□□□□□ -1.47
HMGB1P10-201ENST00000395823 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 TISP43B9A030 160 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 B9A039 149 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 NPIPB6E9PJ23 425 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 POLRMTO00411 1230 aaKnown RBP5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 CYP2C9P11712 490 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 CKMT1AP12532 417 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 NPPBP16860 134 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 ATICP31939 592 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 PPP2CBP62714 309 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 PPP2CAP67775 309 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 KIAA2012Q0VF49 1180 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 SLC5A9Q2M3M2 681 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 ARL6IP4Q66PJ3 421 aaKnown RBP5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 TAPT1Q6NXT6 567 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 TAF2Q6P1X5 1199 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 FAM124AQ86V42 546 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 PSD4Q8NDX1 1056 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 SIMC1Q8NDZ2 872 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 ZSCAN31Q96LW9 406 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 GNRHR2Q96P88 292 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 PRPF18Q99633 342 aaKnown RBP5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 FAM167BQ9BTA0 163 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 SMOC2Q9H3U7 446 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 MAP3K20Q9NYL2 800 aaKnown RBP5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 DTNAQ9Y4J8 743 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 HS3ST4Q9Y661 456 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 CDY1Q9Y6F8 540 aa5.88□□□□□ -1.47
HMGB1P10-201ENST00000395823 IRAK2O43187 625 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 FARP2O94887 1054 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 INMTO95050 263 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 INHBBP09529 407 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 XRCC6P12956 609 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 TPH1P17752 444 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 HK1P19367 917 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 LILRA4P59901 499 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 MC2RQ01718 297 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 GRM7Q14831 915 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 IQCB1Q15051 598 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 ELAVL1Q15717 326 aaKnown RBP5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 ZNF750Q32MQ0 723 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 FAM102AQ5T9C2 384 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 MZT2AQ6P582 158 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 TAX1BP1Q86VP1 789 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 MB21D1Q8N884 522 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 ZNF483Q8TF39 744 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 PPM1MQ96MI6 270 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 TRIB1Q96RU8 372 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 PLA2G3Q9NZ20 509 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 POGKQ9P215 609 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 CTTNBP2NLQ9P2B4 639 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 LPAR3Q9UBY5 353 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 CRYL1Q9Y2S2 319 aa5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 MTO1Q9Y2Z2 717 aaKnown RBP5.87□□□□□ -1.47
HMGB1P10-201ENST00000395823 LEFTY2O00292 366 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 FAM155BO75949 473 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 RHOBTB3O94955 611 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 FAM163BP0C2L3 166 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 ARP10275 920 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 GYS1P13807 737 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 RPS19P39019 145 aaKnown RBP5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 FOXL1Q12952 345 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 METTL24Q5JXM2 366 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 FBXO47Q5MNV8 452 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 NT5DC1Q5TFE4 455 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 204.4 ms