RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 WDR4P57081 412 aaKnown RBP16.24■□□□□ 0.19
CPSF7-202ENST00000394888 LRRC14Q15048 493 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 SLC10A6Q3KNW5 377 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 GALNTL6Q49A17 601 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 JADE1Q6IE81 842 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 GRK7Q8WTQ7 553 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 PLAC1Q9HBJ0 212 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 AGAP1Q9UPQ3 857 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 TRIP12Q14669 1992 aaPredicted RBP16.24■□□□□ 0.19
CPSF7-202ENST00000394888 SIGLEC16A6NMB1 481 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 LACTBL1A8MY62 500 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 GAS2O43903 313 aaKnown RBP16.24■□□□□ 0.19
CPSF7-202ENST00000394888 CILPO75339 1184 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 VCPP55072 806 aaKnown RBP16.24■□□□□ 0.19
CPSF7-202ENST00000394888 CAV1Q03135 178 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 TTC31Q49AM3 519 aaPredicted RBP16.24■□□□□ 0.19
CPSF7-202ENST00000394888 POLNQ7Z5Q5 900 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 MAIP1Q8WWC4 291 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 KHSRPQ92945 711 aaKnown RBP eCLIP16.24■□□□□ 0.194e-8■■□□□ 14
CPSF7-202ENST00000394888 FAM167AQ96KS9 214 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 UBN1Q9NPG3 1134 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 ADCY8P40145 1251 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 SCTRP47872 440 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 OSTNP61366 133 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 CALCOCO2Q13137 446 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 MAPK6Q16659 721 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 TFDP3Q5H9I0 405 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 SMYD5Q6GMV2 418 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 ILDR2Q71H61 639 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 CCDC50Q8IVM0 306 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 ARHGEF2Q92974 986 aaKnown RBP16.24■□□□□ 0.19
CPSF7-202ENST00000394888 MCRS1Q96EZ8 462 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 C16orf70Q9BSU1 422 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 TMEM121Q9BTD3 319 aa16.24■□□□□ 0.19
CPSF7-202ENST00000394888 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.24■□□□□ 0.19
CPSF7-202ENST00000394888 CALB1P05937 261 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 GPD2P43304 727 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 EFCAB12Q6NXP0 572 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 THNSL1Q8IYQ7 743 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 CCDC114Q96M63 670 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 SPATA33Q96N06 139 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 SELENOSQ9BQE4 189 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 DHRS4Q9BTZ2 278 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 ADARB2Q9NS39 739 aaKnown RBP16.23■□□□□ 0.19
CPSF7-202ENST00000394888 CAPN7Q9Y6W3 813 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 SCN4AP35499 1836 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 SNX3O60493 162 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 GJC1P36383 396 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 COPS2P61201 443 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 ZNF699Q32M78 642 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 CKAP2Q8WWK9 683 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 KDM4CQ9H3R0 1056 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 FNBP1LQ5T0N5 605 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 KAZNQ674X7 775 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 EMC1Q8N766 993 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 NAT8LQ8N9F0 302 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 FNIP1Q8TF40 1166 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 HOMER3Q9NSC5 361 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 ABCF3Q9NUQ8 709 aa16.23■□□□□ 0.19
CPSF7-202ENST00000394888 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.23■□□□□ 0.19
CPSF7-202ENST00000394888 RBM47A0AV96 593 aaKnown RBP16.22■□□□□ 0.19
CPSF7-202ENST00000394888 KRT1P04264 644 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 TFAMQ00059 246 aaKnown RBP16.22■□□□□ 0.19
CPSF7-202ENST00000394888 SMTNL2Q2TAL5 461 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 ZNF792Q3KQV3 632 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 PKDCCQ504Y2 493 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 KCNT1Q5JUK3 1230 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 ERO1BQ86YB8 467 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 SUGP1Q8IWZ8 645 aaKnown RBP16.22■□□□□ 0.19
CPSF7-202ENST00000394888 TCP11Q8WWU5 503 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 RBM15Q96T37 977 aaKnown RBP eCLIP16.22■□□□□ 0.193e-6■□□□□ 8.7
CPSF7-202ENST00000394888 KIF9Q9HAQ2 790 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 INTS9Q9NV88 658 aaKnown RBP16.22■□□□□ 0.19
CPSF7-202ENST00000394888 MAGEA4P43358 317 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 CBLBQ13191 982 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 ITIH4Q14624 930 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 CPT1BQ92523 772 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 PLVAPQ9BX97 442 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 NUMBLQ9Y6R0 609 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 CXCL11O14625 94 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 IL4RP24394 825 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 INCA1Q0VD86 236 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 TDRPQ86YL5 185 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 OTUD6BQ8N6M0 293 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 CMASQ8NFW8 434 aaPredicted RBP16.22■□□□□ 0.19
CPSF7-202ENST00000394888 HAUS1Q96CS2 278 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 CDCA5Q96FF9 252 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 CPB2Q96IY4 423 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 NLRP4Q96MN2 994 aa16.22■□□□□ 0.19
CPSF7-202ENST00000394888 SLC25A27O95847 323 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 GAS8O95995 478 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 GHRP10912 638 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 PPIL2Q13356 520 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 XRCC4Q13426 336 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 PIGHQ14442 188 aaPredicted RBP16.21■□□□□ 0.19
CPSF7-202ENST00000394888 DNAJC24Q6P3W2 148 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 ARMC9Q7Z3E5 817 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 TRABD2AQ86V40 505 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 CCDC89Q8N998 374 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 TMEM35BQ8NCS4 154 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms