RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 GGCXP38435 758 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 LGALS3BPQ08380 585 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 STARD8Q92502 1023 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 HOXC10Q9NYD6 342 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 ALG11Q2TAA5 492 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 BTBD8Q5XKL5 378 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 MACC1Q6ZN28 852 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.31■□□□□ 0.04
CCDC50-201ENST00000392455 SLCO1B7G3V0H7 640 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 ALDH18A1P54886 795 aaKnown RBP15.31■□□□□ 0.04
CCDC50-201ENST00000392455 DUOXA2Q1HG44 320 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 AGBL2Q5U5Z8 902 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 C12orf60Q5U649 245 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 CCDC177Q9NQR7 707 aaPredicted RBP15.31■□□□□ 0.04
CCDC50-201ENST00000392455 CD274Q9NZQ7 290 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 SLC30A1Q9Y6M5 507 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 TTC37Q6PGP7 1564 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 ZBTB5O15062 677 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 SNRNP48Q6IEG0 339 aaKnown RBP15.31■□□□□ 0.04
CCDC50-201ENST00000392455 ADCK2Q7Z695 626 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 SETD9Q8NE22 299 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 SPASTQ9UBP0 616 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 RCOR1Q9UKL0 485 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 POTEMA6NI47 508 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 SERPIND1P05546 499 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 ENO3P13929 434 aaPredicted RBP15.31■□□□□ 0.04
CCDC50-201ENST00000392455 MCAMP43121 646 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 COPAP53621 1224 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 NFRKBQ6P4R8 1299 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 TRABDQ9H4I3 376 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 KATNA1O75449 491 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 GCLMP48507 274 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 ZCWPW2Q504Y3 356 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 RASSF6Q6ZTQ3 369 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 TAF8Q7Z7C8 310 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 NR3C1P04150 777 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 SSTR3P32745 418 aaPredicted RBP15.3■□□□□ 0.04
CCDC50-201ENST00000392455 CHI3L1P36222 383 aaPredicted RBP15.3■□□□□ 0.04
CCDC50-201ENST00000392455 REXO4Q9GZR2 422 aaKnown RBP15.3■□□□□ 0.04
CCDC50-201ENST00000392455 EVA1BQ9NVM1 165 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 SLC16A4O15374 487 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 IDH3BO43837 385 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 ZNF862O60290 1169 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 KDSRQ06136 332 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 SMCO1Q147U7 214 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 CLYBLQ8N0X4 340 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 WRNIP1Q96S55 665 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 MMP19Q99542 508 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 OSBPL3Q9H4L5 887 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 MFAP3LO75121 409 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 ATP5BP06576 529 aaKnown RBP15.3■□□□□ 0.04
CCDC50-201ENST00000392455 GFPT1Q06210 699 aaPredicted RBP15.3■□□□□ 0.04
CCDC50-201ENST00000392455 AGAP9Q5VTM2 703 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 MAPRE3Q9UPY8 281 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 M0QYV0 167 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 MMP10P09238 476 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 CCDC185Q8N715 623 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 UBE2QL1A1L167 161 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 SMCO3A2RU48 225 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 MLH1P40692 756 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 TTC7AQ9ULT0 858 aaPredicted RBP15.3■□□□□ 0.04
CCDC50-201ENST00000392455 COQ6Q9Y2Z9 468 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 PALLDQ8WX93 1383 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.3■□□□□ 0.04
CCDC50-201ENST00000392455 CYP2D6P10635 497 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 ZNF200P98182 395 aaPredicted RBP15.3■□□□□ 0.04
CCDC50-201ENST00000392455 POU4F1Q01851 419 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 PTRHD1Q6GMV3 140 aaKnown RBP15.3■□□□□ 0.04
CCDC50-201ENST00000392455 ERAP2Q6P179 960 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 FAM167BQ9BTA0 163 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 NEDD4P46934 1319 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 GSAPA4D1B5 854 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 DFFAO00273 331 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 AP1S1P61966 158 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 RSBN1Q5VWQ0 802 aaPredicted RBP15.3■□□□□ 0.04
CCDC50-201ENST00000392455 WNK4Q96J92 1243 aa15.3■□□□□ 0.04
CCDC50-201ENST00000392455 ASB14A6NK59 587 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 TRIP10Q15642 601 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 PIGBQ92521 554 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 BDH2Q9BUT1 245 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 CEP170Q5SW79 1584 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 ECE2O60344 883 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 ACADSBP45954 432 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 CCT3P49368 545 aaKnown RBP15.29■□□□□ 0.04
CCDC50-201ENST00000392455 RAB25P57735 213 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 ABHD10Q9NUJ1 306 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 FAM153AQ9UHL3 310 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 PCDHGA4Q9Y5G9 962 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 SNX9Q9Y5X1 595 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 A0A0X1KG70 313 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 CD2BP2O95400 341 aaKnown RBP15.29■□□□□ 0.04
CCDC50-201ENST00000392455 PAICSP22234 425 aaKnown RBP15.29■□□□□ 0.04
CCDC50-201ENST00000392455 POTEHQ6S545 545 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 POTEGQ6S5H5 508 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 GAS2L3Q86XJ1 694 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 JADE3Q92613 823 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 ARHGEF5Q12774 1597 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 SRGAP2O75044 1071 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 LIFRP42702 1097 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 TRIM25Q14258 630 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms