RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 RPL21P46778 160 aaKnown RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 KCNJ6P48051 423 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 SERPINB4P48594 390 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 KRT33BQ14525 404 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ZNF772Q68DY9 489 aaPredicted RBP5.22□□□□□ -1.57
LTN1-202ENST00000389194 ACAD10Q6JQN1 1059 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 UTS2BQ765I0 119 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 VIPAS39Q9H9C1 493 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 BLOC1S4Q9NUP1 217 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 CHEK2O96017 543 aa5.21□□□□□ -1.57
LTN1-202ENST00000389194 AKAP5P24588 427 aa5.21□□□□□ -1.57
LTN1-202ENST00000389194 CAV1Q03135 178 aa5.21□□□□□ -1.57
LTN1-202ENST00000389194 CUL2Q13617 745 aa5.21□□□□□ -1.57
LTN1-202ENST00000389194 C16orf87Q6PH81 154 aa5.21□□□□□ -1.57
LTN1-202ENST00000389194 THEM5Q8N1Q8 247 aa5.21□□□□□ -1.57
LTN1-202ENST00000389194 APPL2Q8NEU8 664 aa5.21□□□□□ -1.57
LTN1-202ENST00000389194 SEPT1Q8WYJ6 367 aa5.21□□□□□ -1.57
LTN1-202ENST00000389194 CHST12Q9NRB3 414 aa5.21□□□□□ -1.57
LTN1-202ENST00000389194 ABI2Q9NYB9 513 aaPredicted RBP5.21□□□□□ -1.57
LTN1-202ENST00000389194 KPNA7A9QM74 516 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 E9PBE3 544 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 DDX3XO00571 662 aaKnown RBP eCLIP5.21□□□□□ -1.58
LTN1-202ENST00000389194 TLR2O60603 784 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 KLHL41O60662 606 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 GJB1P08034 283 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 PAMP19021 973 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 CNTN2Q02246 1040 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 TWF1Q12792 350 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 ECM1Q16610 540 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 ZNF720Q7Z2F6 126 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 PACS2Q86VP3 889 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 EDEM1Q92611 657 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 CELF6Q96J87 481 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 FAM167AQ96KS9 214 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 PABPC3Q9H361 631 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 UVRAGQ9P2Y5 699 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 PRRC2BQ5JSZ5 2229 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 A0A1W2PQJ5 194 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 M0QYT0 321 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 EEF2KO00418 725 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 ADAMTS3O15072 1205 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 MYL2P10916 166 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 TFE3P19532 575 aaPredicted RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 EPHB2P29323 1055 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 SHMT1P34896 483 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 SARSP49591 514 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 SGSM1Q2NKQ1 1148 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 FSCBQ5H9T9 825 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 THEMIS2Q5TEJ8 643 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 MTBPQ96DY7 904 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 ASIC4Q96FT7 647 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 APOL5Q9BWW9 433 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 CHST7Q9NS84 486 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 DDX56Q9NY93 547 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 THEGQ9P2T0 379 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 DDX20Q9UHI6 824 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 OVOS2A0A0G2JMS6 1433 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 CBX6O95503 412 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 MAPK10P53779 464 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 TNFAIP2Q03169 654 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 LRRC74AQ0VAA2 488 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 ZNF235Q14590 738 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 PAPD7Q5XG87 772 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 BZW1Q7L1Q6 419 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 USP13Q92995 863 aaPredicted RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 STAMBPL1Q96FJ0 436 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 ITSN1Q15811 1721 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 PRR23AA6NEV1 266 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 VCAM1P19320 739 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 PAPOLAP51003 745 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 RPL10AP62906 217 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 HSP90AA5PQ58FG0 334 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 ZBTB46Q86UZ6 589 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 CREG2Q8IUH2 290 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 SCUBE3Q8IX30 993 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 ZBTB10Q96DT7 871 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 CRAMP1Q96RY5 1269 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 NT5C1AQ9BXI3 368 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 CACYBPQ9HB71 228 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 TMBIM4Q9HC24 238 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 TRIM33Q9UPN9 1127 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 RPS6KL1Q9Y6S9 549 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 PXDNLA1KZ92 1463 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 LINC00854A0A1B0GVQ3 168 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 OPLAHO14841 1288 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 EXTL3O43909 919 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 SH3BGRLO75368 114 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 KCNA4P22459 653 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 OR1G1P47890 313 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 NUDT2P50583 147 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 GJC2Q5T442 439 aaPredicted RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 MEI1Q5TIA1 1274 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 PCNX4Q63HM2 1172 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 WDR59Q6PJI9 974 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 CDKL3Q8IVW4 592 aaPredicted RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 KCTD17Q8N5Z5 321 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 ZNF513Q8N8E2 541 aaPredicted RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 EME1Q96AY2 570 aa5.21□□□□□ -1.58
LTN1-202ENST00000389194 UTP6Q9NYH9 597 aaKnown RBP5.21□□□□□ -1.58
LTN1-202ENST00000389194 ANKRD63C9JTQ0 380 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms