RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 ROPN1BQ9BZX4 212 aaPredicted RBP18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 ROPN1Q9HAT0 212 aaPredicted RBP18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 JPH1Q9HDC5 661 aaPredicted RBP18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 UBE4BO95155 1302 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 MAPK13O15264 365 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 PLA2G6O60733 806 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 PHF2O75151 1096 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 CSDE1O75534 798 aaKnown RBP18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 GJB1P08034 283 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 KCNA2P16389 499 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 PTPRAP18433 802 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 CBX3Q13185 183 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 P3H1Q32P28 736 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 ATP13A4Q4VNC1 1196 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 TAB3Q8N5C8 712 aaPredicted RBP18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 C11orf70Q9BRQ4 267 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 TLE6Q9H808 572 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 CHST7Q9NS84 486 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 ZNF214Q9UL59 606 aaPredicted RBP18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 MAPTP10636 758 aaKnown RBP18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 RARGP13631 454 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 LIG4P49917 911 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 CYP24A1Q07973 514 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 AP1B1Q10567 949 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 SH2D4BQ5SQS7 431 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 TMEM63BQ5T3F8 832 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 TRIM50Q86XT4 487 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 PPFIBP2Q8ND30 876 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 ZNF280CQ8ND82 737 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 CENPKQ9BS16 269 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 ASCC2Q9H1I8 757 aaPredicted RBP18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 NUMBLQ9Y6R0 609 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 CD58P19256 250 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 CCND2P30279 289 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 ACSBG2Q5FVE4 666 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 CAPN12Q6ZSI9 719 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 MAP4K3Q8IVH8 894 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 RNF168Q8IYW5 571 aaPredicted RBP18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 UBL4BQ8N7F7 174 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 SHC3Q92529 594 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 SLC35B4Q969S0 331 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 ZNF184Q99676 751 aaPredicted RBP18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 MIS12Q9H081 205 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 KRT82Q9NSB4 513 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 SYNPO2Q9UMS6 1093 aa18.19■□□□□ 0.5
LDLRAP1-201ENST00000374338 ZNF541Q9H0D2 1346 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 PI4K2BG5E9Z4 385 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 PTPN4P29074 926 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 NEK3P51956 506 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 KRT76Q01546 638 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 DHX34Q14147 1143 aaKnown RBP18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 TMEM270Q6UE05 265 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 RHOT2Q8IXI1 618 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 LENG1Q96BZ8 264 aaPredicted RBP18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 MIPEPQ99797 713 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 CYP26B1Q9NR63 512 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 PASKQ96RG2 1323 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 A6NJR5 290 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 TP73O15350 636 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 MAP3K7O43318 606 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 TCF4P15884 667 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 SEL1L2Q5TEA6 688 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 FKBP1CQ5VVH2 108 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 OR5B17Q8NGF7 314 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 C9orf72Q96LT7 481 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 CCDC28BQ9BUN5 200 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 SLC9A2Q9UBY0 812 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 FBXO40Q9UH90 709 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 TBC1D30Q9Y2I9 924 aa18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 R3HDM2Q9Y2K5 976 aaKnown RBP18.18■□□□□ 0.5
LDLRAP1-201ENST00000374338 PIAS1O75925 651 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 TNFSF9P41273 254 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 CDK7P50613 346 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 JAK3P52333 1124 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 ORC1Q13415 861 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 KAZNQ674X7 775 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 ZBTB8BQ8NAP8 495 aaPredicted RBP18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 FNBP1Q96RU3 617 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 TMEM8AQ9HCN3 771 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 DDX43Q9NXZ2 648 aaKnown RBP18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 GRIN3BO60391 1043 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 STBD1O95210 358 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 MAPK4P31152 587 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 WDR4P57081 412 aaKnown RBP18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 PLOD1Q02809 727 aaPredicted RBP18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 TTLL12Q14166 644 aaPredicted RBP18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 PPP2R5EQ16537 467 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 TDRD10Q5VZ19 366 aaKnown RBP18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 ANKS1BQ7Z6G8 1248 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 DDX1Q92499 740 aaKnown RBP18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 HAUS1Q96CS2 278 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 ASIC3Q9UHC3 531 aa18.17■□□□□ 0.5
LDLRAP1-201ENST00000374338 TREML2Q5T2D2 321 aa18.16■□□□□ 0.5
LDLRAP1-201ENST00000374338 ANKRD35Q8N283 1001 aa18.16■□□□□ 0.5
LDLRAP1-201ENST00000374338 GPD1LQ8N335 351 aa18.16■□□□□ 0.5
LDLRAP1-201ENST00000374338 NAT14Q8WUY8 206 aa18.16■□□□□ 0.5
LDLRAP1-201ENST00000374338 SERPINB12Q96P63 405 aa18.16■□□□□ 0.5
LDLRAP1-201ENST00000374338 GGA3Q9NZ52 723 aa18.16■□□□□ 0.5
LDLRAP1-201ENST00000374338 KIAA1217Q5T5P2 1943 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms