RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 CFAP221Q4G0U5 840 aa21.43■■□□□ 1.02
TMEM53-205ENST00000372244 ISM2Q6H9L7 571 aa21.43■■□□□ 1.02
TMEM53-205ENST00000372244 TAF4BQ92750 862 aa21.43■■□□□ 1.02
TMEM53-205ENST00000372244 MCRS1Q96EZ8 462 aa21.43■■□□□ 1.02
TMEM53-205ENST00000372244 SEPT5Q99719 369 aaPredicted RBP21.43■■□□□ 1.02
TMEM53-205ENST00000372244 CRTAC1Q9NQ79 661 aa21.43■■□□□ 1.02
TMEM53-205ENST00000372244 NXF1Q9UBU9 619 aaKnown RBP21.43■■□□□ 1.02
TMEM53-205ENST00000372244 NME7Q9Y5B8 376 aa21.43■■□□□ 1.02
TMEM53-205ENST00000372244 PPP1R3GB7ZBB8 358 aa21.42■■□□□ 1.02
TMEM53-205ENST00000372244 PDGFRBP09619 1106 aa21.42■■□□□ 1.02
TMEM53-205ENST00000372244 KRT13P13646 458 aa21.42■■□□□ 1.02
TMEM53-205ENST00000372244 LRRC63Q05C16 580 aa21.42■■□□□ 1.02
TMEM53-205ENST00000372244 MTSS1LQ765P7 747 aa21.42■■□□□ 1.02
TMEM53-205ENST00000372244 ITIH5Q86UX2 942 aa21.42■■□□□ 1.02
TMEM53-205ENST00000372244 PBXIP1Q96AQ6 731 aa21.42■■□□□ 1.02
TMEM53-205ENST00000372244 FUBP3Q96I24 572 aaKnown RBP eCLIP21.42■■□□□ 1.02
TMEM53-205ENST00000372244 PI4K2AQ9BTU6 479 aa21.42■■□□□ 1.02
TMEM53-205ENST00000372244 NARSO43776 548 aaKnown RBP21.41■■□□□ 1.02
TMEM53-205ENST00000372244 ASS1P00966 412 aaKnown RBP21.41■■□□□ 1.02
TMEM53-205ENST00000372244 MYL4P12829 197 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 CCNE1P24864 410 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 CYP2F1P24903 491 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 GTF2H1P32780 548 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 PPP1R2P41236 205 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 CCDC142Q17RM4 750 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 ZNF699Q32M78 642 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 GAREM2Q75VX8 874 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 ST13P5Q8NFI4 369 aaPredicted RBP21.41■■□□□ 1.02
TMEM53-205ENST00000372244 SHKBP1Q8TBC3 707 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 ZSWIM3Q96MP5 696 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 TSG101Q99816 390 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 LPIN3Q9BQK8 851 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 SYT15Q9BQS2 421 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 SNX25Q9H3E2 840 aa21.41■■□□□ 1.02
TMEM53-205ENST00000372244 ZNF334Q9HCZ1 680 aaPredicted RBP21.41■■□□□ 1.02
TMEM53-205ENST00000372244 PSMA7O14818 248 aa21.4■■□□□ 1.02
TMEM53-205ENST00000372244 TRIM49P0CI25 452 aa21.4■■□□□ 1.02
TMEM53-205ENST00000372244 TRIM49CP0CI26 452 aa21.4■■□□□ 1.02
TMEM53-205ENST00000372244 GCLMP48507 274 aa21.4■■□□□ 1.02
TMEM53-205ENST00000372244 STIM1Q13586 685 aa21.4■■□□□ 1.02
TMEM53-205ENST00000372244 MAPRE1Q15691 268 aaKnown RBP21.4■■□□□ 1.02
TMEM53-205ENST00000372244 ZNF667Q5HYK9 610 aa21.4■■□□□ 1.02
TMEM53-205ENST00000372244 FOXR2Q6PJQ5 311 aa21.4■■□□□ 1.02
TMEM53-205ENST00000372244 OR6B3Q8NGW1 331 aa21.4■■□□□ 1.02
TMEM53-205ENST00000372244 KIAA1468Q9P260 1216 aa21.4■■□□□ 1.02
TMEM53-205ENST00000372244 TRIM49BA6NDI0 452 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 SLC16A3O15427 465 aaKnown RBP21.39■■□□□ 1.02
TMEM53-205ENST00000372244 ECI2O75521 394 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 FGF19O95750 216 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 HLA-DRAP01903 254 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 SRFP11831 508 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 HMGA1P17096 107 aaKnown RBP21.39■■□□□ 1.02
TMEM53-205ENST00000372244 GJA1P17302 382 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 CDH8P55286 799 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 FAM78AQ5JUQ0 283 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 MYCBPAPQ8TBZ2 947 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 ELMO3Q96BJ8 720 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 GPR88Q9GZN0 384 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 IL21Q9HBE4 155 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 TMEM8AQ9HCN3 771 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 SLC2A4RGQ9NR83 387 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 WNT16Q9UBV4 365 aa21.39■■□□□ 1.02
TMEM53-205ENST00000372244 EPB41P11171 864 aaKnown RBP21.39■■□□□ 1.01
TMEM53-205ENST00000372244 PTPN1P18031 435 aaKnown RBP21.39■■□□□ 1.01
TMEM53-205ENST00000372244 COL9A1P20849 921 aa21.39■■□□□ 1.01
TMEM53-205ENST00000372244 MAGEA11P43364 429 aa21.39■■□□□ 1.01
TMEM53-205ENST00000372244 PSMC1P62191 440 aaKnown RBP21.39■■□□□ 1.01
TMEM53-205ENST00000372244 VEPH1Q14D04 833 aa21.39■■□□□ 1.01
TMEM53-205ENST00000372244 TEAD2Q15562 447 aa21.39■■□□□ 1.01
TMEM53-205ENST00000372244 DDR2Q16832 855 aa21.39■■□□□ 1.01
TMEM53-205ENST00000372244 C4orf50Q6ZRC1 276 aa21.39■■□□□ 1.01
TMEM53-205ENST00000372244 SPATA2LQ8IUW3 424 aaPredicted RBP21.39■■□□□ 1.01
TMEM53-205ENST00000372244 GPR152Q8TDT2 470 aa21.39■■□□□ 1.01
TMEM53-205ENST00000372244 TAS1R2Q8TE23 839 aa21.39■■□□□ 1.01
TMEM53-205ENST00000372244 GIPC2Q8TF65 315 aa21.39■■□□□ 1.01
TMEM53-205ENST00000372244 ASB16Q96NS5 453 aa21.39■■□□□ 1.01
TMEM53-205ENST00000372244 DUSP9Q99956 384 aaKnown RBP21.39■■□□□ 1.01
TMEM53-205ENST00000372244 SMYD3Q9H7B4 428 aa21.39■■□□□ 1.01
TMEM53-205ENST00000372244 TRPV4Q9HBA0 871 aa21.39■■□□□ 1.01
TMEM53-205ENST00000372244 A0A1W2PRU2 124 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 BIN1O00499 593 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 FCARP24071 287 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 GPR15P49685 360 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 RPL10AP62906 217 aaKnown RBP21.38■■□□□ 1.01
TMEM53-205ENST00000372244 CAMK4Q16566 473 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 KRT39Q6A163 491 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 TANGO2Q6ICL3 276 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 TTI2Q6NXR4 508 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 VSTM1Q6UX27 236 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 FBXL6Q8N531 539 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 TRIML1Q8N9V2 468 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 FAM200AQ8TCP9 573 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 SMARCD2Q92925 531 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 ELSPBP1Q96BH3 223 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 PCED1BQ96HM7 432 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 IPO9Q96P70 1041 aaKnown RBP21.38■■□□□ 1.01
TMEM53-205ENST00000372244 PLA2G2FQ9BZM2 168 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 SDCBP2Q9H190 292 aa21.38■■□□□ 1.01
TMEM53-205ENST00000372244 MAGEC2Q9UBF1 373 aaPredicted RBP21.38■■□□□ 1.01
TMEM53-205ENST00000372244 A8MXQ7 604 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms