RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 LOC102724428A0A0B4J2F2 783 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 GOLGA8SH3BPF8 625 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 GOLGA8MH3BSY2 632 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 ENO1P06733 434 aaKnown RBP12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 VCLP18206 1134 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 STIP1P31948 543 aaKnown RBP12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 SIK1P57059 783 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 PTP4A2Q12974 167 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 SCARA3Q6AZY7 606 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 MCOLN2Q8IZK6 566 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 ALLCQ8N6M5 410 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 CPA5Q8WXQ8 436 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 MCUR1Q96AQ8 359 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 HIC2Q96JB3 615 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 ZNF778Q96MU6 729 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 S100A14Q9HCY8 104 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 STRIP2Q9ULQ0 834 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 AFG3L2Q9Y4W6 797 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 PPME1Q9Y570 386 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 TBX3O15119 743 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 IL1BP01584 269 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 ESRRAP11474 423 aaPredicted RBP12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 DSG3P32926 999 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 SREBF1P36956 1147 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 SLC1A1P43005 524 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 VAMP7P51809 220 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 RALGPS1Q5JS13 557 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 VPS52Q8N1B4 723 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 CCDC89Q8N998 374 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 PAFAH2Q99487 392 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 EBF4Q9BQW3 602 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 SLC24A2Q9UI40 661 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 POLIQ9UNA4 740 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.45
SMARCA1-201ENST00000371121 KAT6AQ92794 2004 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 TBCAO75347 108 aaKnown RBP12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 UQCRBP14927 111 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 SLC5A2P31639 672 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 MRPS5P82675 430 aaKnown RBP12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 SNAPC2Q13487 334 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 ADGRG6Q86SQ4 1221 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 CHSY1Q86X52 802 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 TMPRSS6Q8IU80 811 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 ZFPM1Q8IX07 1006 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 GRK7Q8WTQ7 553 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 STMN2Q93045 179 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 VCX3BQ9H321 246 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 VCX3AQ9NNX9 186 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 TOPORSQ9NS56 1045 aaPredicted RBP12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 SENP1Q9P0U3 644 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 CHMP2BQ9UQN3 213 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 FRMD4BQ9Y2L6 1034 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 COL16A1Q07092 1604 aaPredicted RBP12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 PRR5-ARHGAP8B1AHC4 643 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 MAPK4P31152 587 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 CIITAP33076 1130 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 NRLP54845 237 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 ARHGAP8P85298 464 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 BTKQ06187 659 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 UBAP2LQ14157 1087 aaKnown RBP12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 CFAP157Q5JU67 520 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 TMC7Q7Z402 723 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 CENPKQ9BS16 269 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 THTPAQ9BU02 230 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 TRIM55Q9BYV6 548 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 GAKO14976 1311 aa12.26□□□□□ -0.45
SMARCA1-201ENST00000371121 PSMD10O75832 226 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 GAP43P17677 238 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 SULT2A1Q06520 285 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 MYLK3Q32MK0 819 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 OLFML2BQ68BL8 750 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 RBM44Q6ZP01 1051 aaKnown RBP12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 MON1BQ7L1V2 547 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 YIPF2Q9BWQ6 316 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 NYXQ9GZU5 481 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 MTO1Q9Y2Z2 717 aaKnown RBP12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 WDR81Q562E7 1941 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 PI4K2BG5E9Z4 385 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 GSRP00390 522 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 KDSRQ06136 332 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 ACBD5Q5T8D3 534 aaPredicted RBP12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 FYB2Q5VWT5 728 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 KYAT3Q6YP21 454 aaKnown RBP12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 DHDDSQ86SQ9 333 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 PPFIBP2Q8ND30 876 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 FAM111AQ96PZ2 611 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 GPAMQ9HCL2 828 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 IL1RAPL1Q9NZN1 696 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 ZNF831Q5JPB2 1677 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 TM9SF1O15321 606 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 FAM155BO75949 473 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 CCDC166P0CW27 439 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 HOXA13P31271 388 aaPredicted RBP12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 ARSEP51690 589 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 NADK2Q4G0N4 442 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 SH3D19Q5HYK7 790 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 B3GNT9Q6UX72 402 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 KATNAL2Q8IYT4 538 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 CCDC77Q9BR77 488 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 VPS37BQ9H9H4 285 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms