RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GNAT2P19087 354 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 PPM1AP35813 382 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 RPS19P39019 145 aaKnown RBP6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 RPS16P62249 146 aaKnown RBP6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 SLC13A2Q13183 592 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 KRT72Q14CN4 511 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 UBXN2BQ14CS0 331 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 SURF1Q15526 300 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 CSRP2Q16527 193 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 UTP14CQ5TAP6 766 aaKnown RBP6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 KLHDC7AQ5VTJ3 777 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 MFSD5Q6N075 450 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 HIBCHQ6NVY1 386 aaPredicted RBP6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 GPRIN1Q7Z2K8 1008 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 APBB1IPQ7Z5R6 666 aaPredicted RBP6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 FAM83AQ86UY5 434 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 PDSS2Q86YH6 399 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 AOPEPQ8N6M6 819 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 RNF169Q8NCN4 708 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 ZFP28Q8NHY6 868 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 TRIM43Q96BQ3 446 aaPredicted RBP6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 GNRHR2Q96P88 292 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 OR14A2Q96R54 314 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 CPPED1Q9BRF8 314 aaPredicted RBP6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 WDR12Q9GZL7 423 aaKnown RBP6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 CDC23Q9UJX2 597 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 LRCH1Q9Y2L9 728 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 DISP2A7MBM2 1401 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 SPATA31A1Q5TZJ5 1347 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 DHX57Q6P158 1386 aaKnown RBP6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 CDHR4A6H8M9 788 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 DBX1A6NMT0 343 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 APOL1O14791 398 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 TRIM13O60858 407 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 UNC5CO95185 931 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 SLC6A2P23975 617 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 IL6STP40189 918 aaPredicted RBP6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 HTRA4P83105 476 aaPredicted RBP6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 PMS2P11Q13670 270 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 ZRSR2Q15696 482 aaKnown RBP6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 SLFN13Q68D06 897 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 EFCAB12Q6NXP0 572 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 MYLK4Q86YV6 388 aaPredicted RBP6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 ZSCAN18Q8TBC5 510 aaPredicted RBP6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 COLEC11Q9BWP8 271 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 BRIP1Q9BX63 1249 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 CPEB1Q9BZB8 566 aaKnown RBP6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 GPR35Q9HC97 309 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 SPON1Q9HCB6 807 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 PLA2G3Q9NZ20 509 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 PCDHGB2Q9Y5G2 931 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 DUSP10Q9Y6W6 482 aa6.74□□□□□ -1.33
RNU4-39P-201ENST00000362455 PPLO60437 1756 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 DNAJB5O75953 348 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 FGF18O76093 207 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 AGFG2O95081 481 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 ANXA1P04083 346 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 ZNF135P52742 658 aaPredicted RBP6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 CTBP1Q13363 440 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 INO80DQ53TQ3 878 aaPredicted RBP6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 CRB2Q5IJ48 1285 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 ANO1Q5XXA6 986 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 MICU3Q86XE3 530 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 ELOA2Q8IYF1 753 aaPredicted RBP6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 FITM2Q8N6M3 262 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 TMIEQ8NEW7 156 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 OR10H5Q8NGA6 315 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 TBC1D15Q8TC07 691 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 BRI3BPQ8WY22 251 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 ST8SIA2Q92186 375 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 TINAGL1Q9GZM7 467 aaPredicted RBP6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 POGKQ9P215 609 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 SH3BP1Q9Y3L3 701 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 ANKARQ7Z5J8 1434 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 FMN2Q9NZ56 1722 aa6.73□□□□□ -1.33
RNU4-39P-201ENST00000362455 LRP5O75197 1615 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 KIAA0232Q92628 1395 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 A0A1W2PPC4 97 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 ITGB1P05556 798 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 THP07101 528 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 INHBBP09529 407 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 HARSP12081 509 aaKnown RBP6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 MAPK10P53779 464 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 TNFAIP2Q03169 654 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 RAB32Q13637 225 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 TRIM14Q14142 442 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 ELAVL1Q15717 326 aaKnown RBP6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 C4orf46Q504U0 113 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 SLC44A4Q53GD3 710 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 LMBRD2Q68DH5 695 aaPredicted RBP6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 PTF1AQ7RTS3 328 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 USP37Q86T82 979 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 LRRC56Q8IYG6 542 aaPredicted RBP6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 ATP11CQ8NB49 1132 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 OR52N2Q8NGI0 321 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 SCAMP4Q969E2 229 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 KLHL32Q96NJ5 620 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 ZNF518BQ9C0D4 1074 aa6.72□□□□□ -1.33
RNU4-39P-201ENST00000362455 AGAP1Q9UPQ3 857 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms