RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ANAPC2Q9UJX6 822 aa2.14□□□□□ -2.07
SMARCAD1-202ENST00000359052 SMG5Q9UPR3 1016 aaKnown RBP2.14□□□□□ -2.07
SMARCAD1-202ENST00000359052 CEMIPQ8WUJ3 1361 aa2.14□□□□□ -2.07
SMARCAD1-202ENST00000359052 KIAA1671Q9BY89 1806 aa2.14□□□□□ -2.07
SMARCAD1-202ENST00000359052 CACNA1SQ13698 1873 aa2.14□□□□□ -2.07
SMARCAD1-202ENST00000359052 ZSCAN5CA6NGD5 496 aaPredicted RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 STXBP3O00186 592 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ADAMDEC1O15204 470 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 DYRK3O43781 588 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 RTN2O75298 545 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 DEKP35659 375 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 PXNP49023 591 aaPredicted RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 DRG2P55039 364 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ARL13BQ3SXY8 428 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 FAM171BQ6P995 826 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 PXKQ7Z7A4 578 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ANKRD18AQ8IVF6 992 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 FAM109AQ8N4B1 249 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 RUBCNQ92622 972 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 RRP36Q96EU6 259 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ZDHHC12Q96GR4 267 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 NOX5Q96PH1 765 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 BRD7Q9NPI1 651 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 FNDC3AQ9Y2H6 1198 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 EYSQ5T1H1 3165 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 MAST2Q6P0Q8 1798 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 COL4A4P53420 1690 aaPredicted RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 PRR5-ARHGAP8B1AHC4 643 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 PTGESO14684 152 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 NKRFO15226 690 aaKnown RBP eCLIP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 P4HA2O15460 535 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 SPRY1O43609 319 aaPredicted RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ARP10275 920 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 HARSP12081 509 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 PSMA4P25789 261 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 CSE1LP55060 971 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 SRSF2Q01130 221 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 CXCL9Q07325 125 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 BAATQ14032 418 aaPredicted RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 KIAA1211Q6ZU35 1233 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 CATSPER4Q7RTX7 472 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ZER1Q7Z7L7 766 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 SLCO6A1Q86UG4 719 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 GLMPQ8WWB7 406 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 TBCBQ99426 244 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 KRTAP9-2Q9BYQ4 174 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 MYLK2Q9H1R3 596 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ACSS3Q9H6R3 686 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 RXFP1Q9HBX9 757 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 EPB41L4AQ9HCS5 686 aaPredicted RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 SCUBE2Q9NQ36 999 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 COMMD8Q9NX08 183 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 P4HTMQ9NXG6 502 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ZMYND8Q9ULU4 1186 aaPredicted RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 MKI67P46013 3256 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 MYO15AQ9UKN7 3530 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 LRRC10BA6NIK2 292 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 PRR19A6NJB7 356 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 B4E1Z4 1266 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 SPTLC2O15270 562 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 AP1G1O43747 822 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 TRIM16O95361 564 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ATF2P15336 505 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 CDH2P19022 906 aaPredicted RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ACADLP28330 430 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 RTP1P59025 263 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ZXDCQ2QGD7 858 aaPredicted RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 AARDQ4LEZ3 155 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 SYNE4Q8N205 404 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 XXYLT1Q8NBI6 393 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 ZNF507Q8TCN5 953 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 MTG2Q9H4K7 406 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 LIN28AQ9H9Z2 209 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 LTB4R2Q9NPC1 389 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 PLA2G3Q9NZ20 509 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 JAG2Q9Y219 1238 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 TNRC6CQ9HCJ0 1690 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 NSD3Q9BZ95 1437 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 PHLPP2Q6ZVD8 1323 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 FANCGO15287 622 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 TLR2O60603 784 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 KPNA6O60684 536 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 MBD4O95243 580 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 GLI4P10075 376 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 PRKAA2P54646 552 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 CLDN15P56746 228 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 MST1LQ2TV78 715 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 DIEXFQ68CQ4 756 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 CTR9Q6PD62 1173 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 SMG8Q8ND04 991 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 MRPL46Q9H2W6 279 aaKnown RBP2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 GTF3C4Q9UKN8 822 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 CCDC88AQ3V6T2 1871 aa2.13□□□□□ -2.07
SMARCAD1-202ENST00000359052 FAM25EA8MYX2 175 aa2.12□□□□□ -2.07
SMARCAD1-202ENST00000359052 ABLIM1O14639 778 aa2.12□□□□□ -2.07
SMARCAD1-202ENST00000359052 PYGMP11217 842 aa2.12□□□□□ -2.07
SMARCAD1-202ENST00000359052 TRIM21P19474 475 aaKnown RBP2.12□□□□□ -2.07
SMARCAD1-202ENST00000359052 ABCD3P28288 659 aa2.12□□□□□ -2.07
SMARCAD1-202ENST00000359052 ACTN2P35609 894 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms