RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 ZNF669Q96BR6 464 aaPredicted RBP17.14■□□□□ 0.34
SH3RF1-201ENST00000284637 CNBD2Q96M20 576 aa17.14■□□□□ 0.34
SH3RF1-201ENST00000284637 MOSPD1Q9UJG1 213 aa17.14■□□□□ 0.34
SH3RF1-201ENST00000284637 NUDT2P50583 147 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 PDAP1Q13442 181 aaKnown RBP17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 RNF219Q5W0B1 726 aaPredicted RBP17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 ARMCX6Q7L4S7 300 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 ACTRT1Q8TDG2 376 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 MTMR8Q96EF0 704 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 GORASP1Q9BQQ3 440 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 SLC39A10Q9ULF5 831 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 C16orf96A6NNT2 1141 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 SLC26A4O43511 780 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 ZNF571Q7Z3V5 609 aaPredicted RBP17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 KAZALD1Q96I82 304 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 KLHL25Q9H0H3 589 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 ZCWPW1Q9H0M4 648 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 PCDHGB4Q9UN71 923 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 GSTT1P30711 240 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 PRKCEQ02156 737 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 TBX2Q13207 712 aaPredicted RBP17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 KIZQ2M2Z5 673 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 TARS2Q9BW92 718 aaKnown RBP17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 RNPEPL1Q9HAU8 725 aa17.14■□□□□ 0.33
SH3RF1-201ENST00000284637 FKBP6O75344 327 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 MED24O75448 989 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 NFKBIAP25963 317 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 TMEM132DQ14C87 1099 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 INAQ16352 499 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 PCSK7Q16549 785 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 SPDYAQ5MJ70 313 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 LRRC6Q86X45 466 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 TRIM54Q9BYV2 358 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 NDEL1Q9GZM8 345 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 AK9Q5TCS8 1911 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 EEF2KO00418 725 aaKnown RBP17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 LIN7AO14910 233 aaPredicted RBP17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 MYO1DO94832 1006 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 FDX1P10109 184 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 TXNP10599 105 aaKnown RBP17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 ATP6V1E1P36543 226 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 VCPP55072 806 aaKnown RBP17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 MEI1Q5TIA1 1274 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 PABPC5Q96DU9 382 aaKnown RBP17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 SEMA4AQ9H3S1 761 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 RNF17Q9BXT8 1623 aaKnown RBP17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 SMAPO00193 183 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 ITGA4P13612 1032 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 PPIDQ08752 370 aaKnown RBP17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 TTC30BQ8N4P2 665 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 MSH4O15457 936 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 NUP107P57740 925 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 UBE3AQ05086 875 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 MTDHQ86UE4 582 aaKnown RBP17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 ZNF677Q86XU0 584 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 PLD3Q8IV08 490 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 FBXO36Q8NEA4 188 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 OTUD5Q96G74 571 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 MMP19Q99542 508 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 MXRA8Q9BRK3 442 aa17.13■□□□□ 0.33
SH3RF1-201ENST00000284637 MYO1GB0I1T2 1018 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 GPD1P21695 349 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 DCTN2Q13561 401 aaKnown RBP17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 STILQ15468 1287 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 DAGLBQ8NCG7 672 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 MAGEC3Q8TD91 643 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 GANCQ8TET4 914 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 SCFD1Q8WVM8 642 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 TATDN2Q93075 761 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 GCNAQ96QF7 691 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 NIF3L1Q9GZT8 377 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 KCNH7Q9NS40 1196 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 PIN4Q9Y237 131 aaKnown RBP17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 DYTNA2CJ06 578 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 RARBP10826 455 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 KCNT1Q5JUK3 1230 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 GPR141Q7Z602 305 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 PRUNE1Q86TP1 453 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 SCUBE1Q8IWY4 988 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 NR1H4Q96RI1 486 aaPredicted RBP17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 DMAP1Q9NPF5 467 aaPredicted RBP17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 INO80Q9ULG1 1556 aaPredicted RBP17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 ACCSLQ4AC99 568 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 TTMPQ5BVD1 217 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 CENPPQ6IPU0 288 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 FBXO33Q7Z6M2 555 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 ATPAF2Q8N5M1 289 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 ATXN2LQ8WWM7 1075 aaKnown RBP17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 RIT2Q99578 217 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 ABCA6Q8N139 1617 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 APPL2Q8NEU8 664 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 WNK4Q96J92 1243 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 CNDP1Q96KN2 507 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 TEX12Q9BXU0 123 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 EXTL3O43909 919 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 CAMTA2O94983 1202 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 VCAM1P19320 739 aa17.12■□□□□ 0.33
SH3RF1-201ENST00000284637 ST3GAL1Q11201 340 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms