RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PHKG2P15735 406 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 FCHO2Q0JRZ9 810 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 SNX30Q5VWJ9 437 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 IER5Q5VY09 327 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 IZUMO3Q5VZ72 239 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 TMC7Q7Z402 723 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 FANCBQ8NB91 859 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 RDM1Q8NG50 284 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 FAM45AQ8TCE6 357 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 RNFT2Q96EX2 444 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 TBATAQ96M53 351 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 PARK7Q99497 189 aaKnown RBP11.54□□□□□ -0.56
MSH6-201ENST00000234420 MYH11P35749 1972 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 IL6P05231 212 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 PLA2G4BP0C869 781 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 IZUMO2Q6UXV1 221 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 FAM129BQ96TA1 746 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 CCDC28BQ9BUN5 200 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 SOHLH2Q9NX45 425 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 SNX6Q9UNH7 406 aa11.54□□□□□ -0.56
MSH6-201ENST00000234420 ASXL1Q8IXJ9 1541 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 CENPXA8MT69 81 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 TK2O00142 265 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 FYNP06241 537 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 ZNF23P17027 643 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 GTF2E2P29084 291 aaKnown RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 HIRAP54198 1017 aaPredicted RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 POU5F1Q01860 360 aaKnown RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 PTGISQ16647 500 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 SAMD7Q7Z3H4 446 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 RNF149Q8NC42 400 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 TUBA8Q9NY65 449 aaPredicted RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 TRAPPC3O43617 180 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 FGAP02671 866 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 FEN1P39748 380 aaKnown RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 TNFAIP2Q03169 654 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 CCNIQ14094 377 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 MYBPC2Q14324 1141 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 RBBP8NLQ8NC74 664 aaPredicted RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 RUVBL2Q9Y230 463 aaKnown RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 AGTP01019 485 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 SRP54P61011 504 aaKnown RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 ZNF618Q5T7W0 954 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 PTRHD1Q6GMV3 140 aaKnown RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 BRINP3Q76B58 766 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 MLPHQ9BV36 600 aaPredicted RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 CD274Q9NZQ7 290 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 PCDHA4Q9UN74 947 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 PCDHB12Q9Y5F1 795 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 PRLP01236 227 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 MBL2P11226 248 aaPredicted RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 SCTRP47872 440 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 ENGASEQ8NFI3 743 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 RNPC3Q96LT9 517 aaKnown RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 KLHL4Q9C0H6 718 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 CNOT8Q9UFF9 292 aaKnown RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 ZC3H7BQ9UGR2 993 aaKnown RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 PIK3R1P27986 724 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 PSMB9P28065 219 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 NUDT2P50583 147 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 CSNK2BP67870 215 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 FUT11Q495W5 492 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 TMEM63BQ5T3F8 832 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 SUN5Q8TC36 379 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 RSPH1Q8WYR4 309 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 KRT84Q9NSB2 600 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 ATP6V1HQ9UI12 483 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 FEM1BQ9UK73 627 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 CHURC1-FNTBB4DL54 471 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 RAD51BO15315 384 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 CYP2D6P10635 497 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 AP1S2P56377 157 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 MMRN1Q13201 1228 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 JAMLQ86YT9 394 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 SPATA4Q8NEY3 305 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 TMEM143Q96AN5 459 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 PACSIN1Q9BY11 444 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 WDR11Q9BZH6 1224 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 NMRK2Q9NPI5 230 aa11.53□□□□□ -0.56
MSH6-201ENST00000234420 MTO1Q9Y2Z2 717 aaKnown RBP11.53□□□□□ -0.56
MSH6-201ENST00000234420 AOX1Q06278 1338 aa11.52□□□□□ -0.56
MSH6-201ENST00000234420 SAC3D1A6NKF1 404 aa11.52□□□□□ -0.56
MSH6-201ENST00000234420 DYRK3O43781 588 aa11.52□□□□□ -0.56
MSH6-201ENST00000234420 MED26O95402 600 aa11.52□□□□□ -0.56
MSH6-201ENST00000234420 GPATCH4Q5T3I0 446 aaKnown RBP11.52□□□□□ -0.56
MSH6-201ENST00000234420 FAM102AQ5T9C2 384 aaPredicted RBP11.52□□□□□ -0.56
MSH6-201ENST00000234420 DEFB132Q7Z7B7 95 aa11.52□□□□□ -0.56
MSH6-201ENST00000234420 PACS2Q86VP3 889 aa11.52□□□□□ -0.56
MSH6-201ENST00000234420 RBM41Q96IZ5 413 aaKnown RBP11.52□□□□□ -0.56
MSH6-201ENST00000234420 ZNF624Q9P2J8 865 aaPredicted RBP11.52□□□□□ -0.56
MSH6-201ENST00000234420 SNX13Q9Y5W8 968 aa11.52□□□□□ -0.56
MSH6-201ENST00000234420 RFC5P40937 340 aa11.52□□□□□ -0.56
MSH6-201ENST00000234420 NCF4Q15080 339 aa11.52□□□□□ -0.56
MSH6-201ENST00000234420 USP39Q53GS9 565 aaKnown RBP11.52□□□□□ -0.56
MSH6-201ENST00000234420 CCSAPQ6IQ19 270 aaPredicted RBP11.52□□□□□ -0.56
MSH6-201ENST00000234420 ISLR2Q6UXK2 745 aa11.52□□□□□ -0.56
MSH6-201ENST00000234420 CLVS1Q8IUQ0 354 aaPredicted RBP11.52□□□□□ -0.56
MSH6-201ENST00000234420 GMCL1Q96IK5 515 aa11.52□□□□□ -0.56
MSH6-201ENST00000234420 KATNAL1Q9BW62 490 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms