RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 HMGXB4Q9UGU5 601 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 GRIN2DO15399 1336 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 PSTPIP1O43586 416 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 MYZAPP0CAP1 466 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 FGFR4P22455 802 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 TMOD1P28289 359 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 GNGT1P63211 74 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 PPARDQ03181 441 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 TMEM35BQ8NCS4 154 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 FAM49AQ9H0Q0 323 aaPredicted RBP19.19■□□□□ 0.66
USP18-201ENST00000215794 SMYD3Q9H7B4 428 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 SCN10AQ9Y5Y9 1956 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 TMEM191CA6NGB0 347 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 TREHO43280 583 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 RPS6KA5O75582 802 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 LSM8O95777 96 aaKnown RBP19.18■□□□□ 0.66
USP18-201ENST00000215794 MCF2P10911 925 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 CD19P15391 556 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 NR1D1P20393 614 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 SKOR1P84550 965 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 KRT17Q04695 432 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 POU5F1BQ06416 359 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 PDCLQ13371 301 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 PPP1R7Q15435 360 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 SKIDA1Q1XH10 827 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 SLC10A6Q3KNW5 377 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 RUFY4Q6ZNE9 571 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 RNF180Q86T96 592 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 IFNLR1Q8IU57 520 aaPredicted RBP19.18■□□□□ 0.66
USP18-201ENST00000215794 CXorf38Q8TB03 319 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 TWNKQ96RR1 684 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 CYTH4Q9UIA0 394 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 GOLGA6L10A6NI86 522 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 SHBGP04278 402 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 CALB1P05937 261 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 KLF1Q13351 362 aaPredicted RBP19.18■□□□□ 0.66
USP18-201ENST00000215794 ZNF667Q5HYK9 610 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 DNAJC24Q6P3W2 148 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 C7orf31Q8N865 590 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 RNF25Q96BH1 459 aaPredicted RBP19.18■□□□□ 0.66
USP18-201ENST00000215794 SCLT1Q96NL6 688 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 BCO2Q9BYV7 579 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 DCLK3Q9C098 648 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 PAK6Q9NQU5 681 aaPredicted RBP19.18■□□□□ 0.66
USP18-201ENST00000215794 PCDHGC3Q9UN70 934 aa19.18■□□□□ 0.66
USP18-201ENST00000215794 HMGB1P1B2RPK0 211 aaPredicted RBP19.17■□□□□ 0.66
USP18-201ENST00000215794 F8VP50 259 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 PI4K2BG5E9Z4 385 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 TULP2O00295 520 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 TSPAN1O60635 241 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 ACLYP53396 1101 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 PMS2P54278 862 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 TRIP13Q15645 432 aaPredicted RBP19.17■□□□□ 0.66
USP18-201ENST00000215794 PPP1R2P3Q6NXS1 205 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 KDM7AQ6ZMT4 941 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 KATNAL2Q8IYT4 538 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 KIAA0319LQ8IZA0 1049 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 RUNDC3BQ96NL0 473 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 BCCIPQ9P287 314 aaKnown RBP eCLIP19.17■□□□□ 0.66
USP18-201ENST00000215794 IP6K2Q9UHH9 426 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 COL1A2P08123 1366 aa19.17■□□□□ 0.66
USP18-201ENST00000215794 ZEB2O60315 1214 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 ERLIN2O94905 339 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 HPDP32754 393 aaPredicted RBP19.16■□□□□ 0.66
USP18-201ENST00000215794 CDH5P33151 784 aaPredicted RBP19.16■□□□□ 0.66
USP18-201ENST00000215794 RAD23BP54727 409 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 ADCY2Q08462 1091 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 ERICH1Q86X53 443 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 ART4Q93070 314 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 ACSF2Q96CM8 615 aaPredicted RBP19.16■□□□□ 0.66
USP18-201ENST00000215794 TP73O15350 636 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 EIF4BP23588 611 aaKnown RBP19.16■□□□□ 0.66
USP18-201ENST00000215794 CST5P28325 142 aaPredicted RBP19.16■□□□□ 0.66
USP18-201ENST00000215794 POLR2BP30876 1174 aaKnown RBP19.16■□□□□ 0.66
USP18-201ENST00000215794 MAN1A1P33908 653 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 NKX3-2P78367 333 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 PTPN20Q4JDL3 420 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 PPP1R15BQ5SWA1 713 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 TXNRD3NBQ6F5E7 133 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 GDF6Q6KF10 455 aaPredicted RBP19.16■□□□□ 0.66
USP18-201ENST00000215794 DCUN1D2Q6PH85 259 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 FBXO46Q6PJ61 603 aaPredicted RBP19.16■□□□□ 0.66
USP18-201ENST00000215794 KATNAL1Q9BW62 490 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 OSBPL8Q9BZF1 889 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 CXCL16Q9H2A7 254 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 GINS2Q9Y248 185 aa19.16■□□□□ 0.66
USP18-201ENST00000215794 DCDC2CA8MYV0 355 aa19.15■□□□□ 0.66
USP18-201ENST00000215794 GUCY1A3Q02108 690 aa19.15■□□□□ 0.66
USP18-201ENST00000215794 SLC4A11Q8NBS3 891 aa19.15■□□□□ 0.66
USP18-201ENST00000215794 SLCO2A1Q92959 643 aa19.15■□□□□ 0.66
USP18-201ENST00000215794 CCDC114Q96M63 670 aa19.15■□□□□ 0.66
USP18-201ENST00000215794 ELOVL4Q9GZR5 314 aa19.15■□□□□ 0.66
USP18-201ENST00000215794 PABPC3Q9H361 631 aaKnown RBP19.15■□□□□ 0.66
USP18-201ENST00000215794 SEMA4AQ9H3S1 761 aa19.15■□□□□ 0.66
USP18-201ENST00000215794 NRCAMQ92823 1304 aa19.15■□□□□ 0.66
USP18-201ENST00000215794 C17orf102A2RUQ5 167 aa19.15■□□□□ 0.66
USP18-201ENST00000215794 GOLGA8SH3BPF8 625 aa19.15■□□□□ 0.66
USP18-201ENST00000215794 EIF3HO15372 352 aaKnown RBP eCLIP19.15■□□□□ 0.66
USP18-201ENST00000215794 KRT10P13645 584 aa19.15■□□□□ 0.66
USP18-201ENST00000215794 KIZQ2M2Z5 673 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms