RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 H2AFVQ71UI9 128 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 FAM71AQ8IYT1 594 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 SYCE1Q8N0S2 351 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 DTWD2Q8NBA8 298 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 FLCNQ8NFG4 579 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 LINC01599Q8WXQ3 324 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 SHC3Q92529 594 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 NECTIN4Q96NY8 510 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 FAM49AQ9H0Q0 323 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-234ENST00000642041 IFT122Q9HBG6 1241 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 ADAMTS1Q9UHI8 967 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 GUCA1BQ9UMX6 200 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 PCDHB12Q9Y5F1 795 aa18.39■□□□□ 0.53
PHGDH-234ENST00000642041 M0QZ92 97 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 FSCN2O14926 492 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 STAG3L1P0CL83 205 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 P4HA1P13674 534 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 ATICP31939 592 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 ERVFC1P60507 584 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 PTK2Q05397 1052 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 BIRC3Q13489 604 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 FBXO47Q5MNV8 452 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 CRELD2Q6UXH1 353 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-234ENST00000642041 TRIM72Q6ZMU5 477 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 RTN4RL1Q86UN2 441 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-234ENST00000642041 KIAA0319LQ8IZA0 1049 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 PPM1KQ8N3J5 372 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 RTP3Q9BQQ7 232 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 LCMT1Q9UIC8 334 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 NAGPAQ9UK23 515 aa18.38■□□□□ 0.53
PHGDH-234ENST00000642041 REXO2Q9Y3B8 237 aaKnown RBP18.38■□□□□ 0.53
PHGDH-234ENST00000642041 A0A087WZ62 844 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 A0A1B0GUA9 196 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 TISP43B9A030 160 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 CTIFO43310 598 aaKnown RBP18.37■□□□□ 0.53
PHGDH-234ENST00000642041 XPOTO43592 962 aaKnown RBP18.37■□□□□ 0.53
PHGDH-234ENST00000642041 ASGR2P07307 311 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 PIK3CAP42336 1068 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 NLRP11P59045 1033 aaKnown RBP18.37■□□□□ 0.53
PHGDH-234ENST00000642041 CKAP4Q07065 602 aaKnown RBP18.37■□□□□ 0.53
PHGDH-234ENST00000642041 TRPC3Q13507 836 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 MTERF4Q7Z6M4 381 aaKnown RBP18.37■□□□□ 0.53
PHGDH-234ENST00000642041 ZDHHC14Q8IZN3 488 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 TRIM11Q96F44 468 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 FDXACB1Q9BRP7 624 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-234ENST00000642041 CCDC94Q9BW85 323 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-234ENST00000642041 FTHL17Q9BXU8 183 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 IKZF4Q9H2S9 585 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 POMKQ9H5K3 350 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 CDC23Q9UJX2 597 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 PCDHB2Q9Y5E7 798 aa18.37■□□□□ 0.53
PHGDH-234ENST00000642041 RIOK3O14730 519 aaKnown RBP18.36■□□□□ 0.53
PHGDH-234ENST00000642041 VTNP04004 478 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 TMEM191BP0C7N4 346 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 NPR3P17342 541 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 TCP1P17987 556 aaKnown RBP18.36■□□□□ 0.53
PHGDH-234ENST00000642041 ACOT2P49753 483 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 PDE6CP51160 858 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 CRYBB1P53674 252 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-234ENST00000642041 GFPT1Q06210 699 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-234ENST00000642041 TCEAL1Q15170 157 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 ST3GAL2Q16842 350 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 NOTUMQ6P988 496 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 RUFY4Q6ZNE9 571 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 RHOT2Q8IXI1 618 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 EVPLQ92817 2033 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 ZBTB10Q96DT7 871 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 ACAP3Q96P50 834 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 AGPAT1Q99943 283 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 AAASQ9NRG9 546 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 C2CD2Q9Y426 696 aa18.36■□□□□ 0.53
PHGDH-234ENST00000642041 UQCRHLA0A096LP55 91 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 ANKRD62A6NC57 917 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 EFCAB8A8MWE9 144 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 FOXN3O00409 490 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-234ENST00000642041 FGF18O76093 207 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 HLA-DRAP01903 254 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 UQCRHP07919 91 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 TMEM253P0C7T8 217 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 EIF4BP23588 611 aaKnown RBP18.35■□□□□ 0.53
PHGDH-234ENST00000642041 YARSP54577 528 aaKnown RBP18.35■□□□□ 0.53
PHGDH-234ENST00000642041 ARID5AQ03989 594 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 ITIH3Q06033 890 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 ARHGAP44Q17R89 818 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 RSPO4Q2I0M5 234 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-234ENST00000642041 PAPD7Q5XG87 772 aaKnown RBP18.35■□□□□ 0.53
PHGDH-234ENST00000642041 CES5AQ6NT32 575 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 ZNF571Q7Z3V5 609 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-234ENST00000642041 HACE1Q8IYU2 909 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 SLC30A5Q8TAD4 765 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 PLEKHO2Q8TD55 490 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 HELQQ8TDG4 1101 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 TAS1R2Q8TE23 839 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 CTNNBL1Q8WYA6 563 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-234ENST00000642041 RUBCNQ92622 972 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 HINFPQ9BQA5 517 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 ADAM7Q9H2U9 754 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 AGO3Q9H9G7 860 aaKnown RBP18.35■□□□□ 0.53
PHGDH-234ENST00000642041 PDE11AQ9HCR9 933 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 TOPORSQ9NS56 1045 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms