RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 MTMR3Q13615 1198 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 MORC3Q14149 939 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 VEPH1Q14D04 833 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 ZNF667Q5HYK9 610 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 TMEM31Q5JXX7 168 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 TDRD10Q5VZ19 366 aaKnown RBP15.28■□□□□ 0.04
SDHD-209ENST00000640554 SV2AQ7L0J3 742 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 ZC3H3Q8IXZ2 948 aaKnown RBP15.28■□□□□ 0.04
SDHD-209ENST00000640554 SMYD4Q8IYR2 804 aaPredicted RBP15.28■□□□□ 0.04
SDHD-209ENST00000640554 ATAD1Q8NBU5 361 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 FUBP3Q96I24 572 aaKnown RBP eCLIP15.28■□□□□ 0.04
SDHD-209ENST00000640554 FAXDC2Q96IV6 333 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 PGLYRP2Q96PD5 576 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 GPR88Q9GZN0 384 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 XYLT2Q9H1B5 865 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 SNX25Q9H3E2 840 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 KIAA1468Q9P260 1216 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 CDH9Q9ULB4 789 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 YIPF1Q9Y548 306 aa15.28■□□□□ 0.04
SDHD-209ENST00000640554 GOLGA6L22H0YM25 854 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 VNN2O95498 520 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 SP100P23497 879 aaPredicted RBP15.27■□□□□ 0.04
SDHD-209ENST00000640554 GNL1P36915 607 aaPredicted RBP15.27■□□□□ 0.04
SDHD-209ENST00000640554 MYL6P60660 151 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 TDGQ13569 410 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 ZNF699Q32M78 642 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 INTS6LQ5JSJ4 861 aaKnown RBP15.27■□□□□ 0.04
SDHD-209ENST00000640554 ANKRD40Q6AI12 368 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 C4orf50Q6ZRC1 276 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 MTSS1LQ765P7 747 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 PDZD4Q76G19 769 aaPredicted RBP15.27■□□□□ 0.04
SDHD-209ENST00000640554 GET4Q7L5D6 327 aaPredicted RBP15.27■□□□□ 0.04
SDHD-209ENST00000640554 LRRTM3Q86VH5 581 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 CCDC150Q8NCX0 1101 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 KHSRPQ92945 711 aaKnown RBP eCLIP15.27■□□□□ 0.041e-9■■■□□ 16.6
SDHD-209ENST00000640554 CEP295NLQ96MC4 621 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 CEP63Q96MT8 703 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 MYADMQ96S97 322 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 TMEM209Q96SK2 561 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 CORO1BQ9BR76 489 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 IMPG2Q9BZV3 1241 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 METTL14Q9HCE5 456 aaKnown RBP15.27■□□□□ 0.04
SDHD-209ENST00000640554 ASAH2Q9NR71 780 aa15.27■□□□□ 0.04
SDHD-209ENST00000640554 MTCL1Q9Y4B5 1905 aaKnown RBP15.26■□□□□ 0.03
SDHD-209ENST00000640554 N4BP1O75113 896 aaKnown RBP15.26■□□□□ 0.03
SDHD-209ENST00000640554 HAPLN1P10915 354 aaPredicted RBP15.26■□□□□ 0.03
SDHD-209ENST00000640554 TRIM21P19474 475 aaKnown RBP15.26■□□□□ 0.03
SDHD-209ENST00000640554 RPL10AP62906 217 aaKnown RBP15.26■□□□□ 0.03
SDHD-209ENST00000640554 DLG4P78352 724 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 SIGLEC14Q08ET2 396 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 MGAT5BQ3V5L5 792 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 CFAP221Q4G0U5 840 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 KRT39Q6A163 491 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 FAM171BQ6P995 826 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 FILIP1Q7Z7B0 1213 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 FEZF2Q8TBJ5 459 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 KBTBD7Q8WVZ9 684 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 ERCC4Q92889 916 aaPredicted RBP15.26■□□□□ 0.03
SDHD-209ENST00000640554 FGF13Q92913 245 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 PSMG2Q969U7 264 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 FAM84AQ96KN4 292 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 DNAI2Q9GZS0 605 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 KCNK12Q9HB15 430 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 TMEM8AQ9HCN3 771 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 HCFC1R1Q9NWW0 138 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 CEP72Q9P209 647 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 ZMYM5Q9UJ78 669 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 SLC27A5Q9Y2P5 690 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 PLXNA3P51805 1871 aa15.26■□□□□ 0.03
SDHD-209ENST00000640554 ANK1P16157 1881 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 PRR33A8MZF0 331 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 ANHXE9PGG2 379 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 FGFR1OPO95684 399 aaKnown RBP15.25■□□□□ 0.03
SDHD-209ENST00000640554 GNA14O95837 355 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 ASS1P00966 412 aaKnown RBP15.25■□□□□ 0.03
SDHD-209ENST00000640554 MAGEA11P43364 429 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 NTHL1P78549 312 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 TAF12Q16514 161 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 C1orf220Q5T0J3 134 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 SCARA3Q6AZY7 606 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 VSTM1Q6UX27 236 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 TRIM67Q6ZTA4 783 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 BMP8AQ7Z5Y6 402 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 FRMD5Q7Z6J6 570 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 DNAJB7Q7Z6W7 309 aaPredicted RBP15.25■□□□□ 0.03
SDHD-209ENST00000640554 SPATA2LQ8IUW3 424 aaPredicted RBP15.25■□□□□ 0.03
SDHD-209ENST00000640554 TNIP3Q96KP6 325 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 PKMYT1Q99640 499 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 SYT15Q9BQS2 421 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 FAM124BQ9H5Z6 455 aaPredicted RBP15.25■□□□□ 0.03
SDHD-209ENST00000640554 ABI2Q9NYB9 513 aaPredicted RBP15.25■□□□□ 0.03
SDHD-209ENST00000640554 NXF1Q9UBU9 619 aaKnown RBP15.25■□□□□ 0.03
SDHD-209ENST00000640554 ARMCX3Q9UH62 379 aaPredicted RBP15.25■□□□□ 0.03
SDHD-209ENST00000640554 GTF3C4Q9UKN8 822 aa15.25■□□□□ 0.03
SDHD-209ENST00000640554 SOBPA7XYQ1 873 aa15.24■□□□□ 0.03
SDHD-209ENST00000640554 PPP1R3GB7ZBB8 358 aa15.24■□□□□ 0.03
SDHD-209ENST00000640554 VNN1O95497 513 aa15.24■□□□□ 0.03
SDHD-209ENST00000640554 HLA-DRAP01903 254 aa15.24■□□□□ 0.03
SDHD-209ENST00000640554 PIK3CAP42336 1068 aa15.24■□□□□ 0.03
SDHD-209ENST00000640554 GCLMP48507 274 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms