RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 EMILIN2Q9BXX0 1053 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 NRDE2Q9H7Z3 1164 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 TBC1D13Q9NVG8 400 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 FBXO4Q9UKT5 387 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 ARHGAP26Q9UNA1 814 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 FZD1Q9UP38 647 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 TET1Q8NFU7 2136 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 GRXCR2A6NFK2 248 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 H3BQV1 296 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 OAS1P00973 400 aaKnown RBP6.97□□□□□ -1.29
RTTN-215ENST00000639487 TPM3P06753 285 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 ITGA4P13612 1032 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 UBA7P41226 1012 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 TNFRSF4P43489 277 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 TNNT3P45378 269 aaPredicted RBP6.97□□□□□ -1.29
RTTN-215ENST00000639487 NDUFA8P51970 172 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 EPHB4P54760 987 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 SEMA3BQ13214 749 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 HTR3DQ70Z44 454 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 POLNQ7Z5Q5 900 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 TADA2BQ86TJ2 420 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 GPBP1Q86WP2 473 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 ADHFE1Q8IWW8 467 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 NECAB1Q8N987 351 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 STON2Q8WXE9 905 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 ZNF707Q96C28 371 aaPredicted RBP6.97□□□□□ -1.29
RTTN-215ENST00000639487 MCRS1Q96EZ8 462 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 SLC39A13Q96H72 371 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 ADPGKQ9BRR6 497 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 ELOVL4Q9GZR5 314 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 BRD8Q9H0E9 1235 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 TJP2Q9UDY2 1190 aa6.97□□□□□ -1.29
RTTN-215ENST00000639487 MRPL42Q9Y6G3 142 aaKnown RBP6.97□□□□□ -1.29
RTTN-215ENST00000639487 SMIM28A0A1B0GU29 152 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 DRGXA6NNA5 263 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 PES1O00541 588 aaKnown RBP6.96□□□□□ -1.29
RTTN-215ENST00000639487 SLC7A4O43246 635 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 GSTM1P09488 218 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 CPA1P15085 419 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 CNGA1P29973 690 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 MCM4P33991 863 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 MAGEA6P43360 314 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 MRE11P49959 708 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 GSTM4Q03013 218 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 SKIV2LQ15477 1246 aaKnown RBP6.96□□□□□ -1.29
RTTN-215ENST00000639487 USP41Q3LFD5 358 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 DRICH1Q6PGQ1 229 aaPredicted RBP6.96□□□□□ -1.29
RTTN-215ENST00000639487 LRSAM1Q6UWE0 723 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 GAS2L3Q86XJ1 694 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 EXOC4Q96A65 974 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 ISG20Q96AZ6 181 aaKnown RBP6.96□□□□□ -1.29
RTTN-215ENST00000639487 ACAP3Q96P50 834 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 STK33Q9BYT3 514 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 C8orf33Q9H7E9 229 aaPredicted RBP6.96□□□□□ -1.29
RTTN-215ENST00000639487 HSPBP1Q9NZL4 362 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 ADAM28Q9UKQ2 775 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 PCDHGB2Q9Y5G2 931 aa6.96□□□□□ -1.29
RTTN-215ENST00000639487 ZNF233A6NK53 670 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 LRRIQ3A6PVS8 624 aaPredicted RBP6.96□□□□□ -1.3
RTTN-215ENST00000639487 WASH3PC4AMC7 463 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 VDRP11473 427 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 PRLRP16471 622 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 CTNNA2P26232 953 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 TERF1P54274 439 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 PSMC6P62333 389 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 STRN3Q13033 797 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 STIM1Q13586 685 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 CCDC170Q8IYT3 715 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 MYCBPAPQ8TBZ2 947 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 COPS5Q92905 334 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 UBE2OQ9C0C9 1292 aaKnown RBP6.96□□□□□ -1.3
RTTN-215ENST00000639487 ZNF212Q9UDV6 495 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 NOCTQ9UK39 431 aaKnown RBP6.96□□□□□ -1.3
RTTN-215ENST00000639487 CAPN11Q9UMQ6 739 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 KIAA1024Q9UPX6 916 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 YBX2Q9Y2T7 364 aaKnown RBP6.96□□□□□ -1.3
RTTN-215ENST00000639487 AKR1B10O60218 316 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 NR3C1P04150 777 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 GTF2F1P35269 517 aaKnown RBP eCLIP6.96□□□□□ -1.3
RTTN-215ENST00000639487 BMS1Q14692 1282 aaKnown RBP6.96□□□□□ -1.3
RTTN-215ENST00000639487 PPP2R5DQ14738 602 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 CCDC142Q17RM4 750 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 KRT39Q6A163 491 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 ITIH5Q86UX2 942 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 DCP1BQ8IZD4 617 aaKnown RBP6.96□□□□□ -1.3
RTTN-215ENST00000639487 GPT2Q8TD30 523 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 RNF25Q96BH1 459 aaPredicted RBP6.96□□□□□ -1.3
RTTN-215ENST00000639487 RTP4Q96DX8 246 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 IFT43Q96FT9 208 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 TSG101Q99816 390 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 PRMT1Q99873 361 aaKnown RBP6.96□□□□□ -1.3
RTTN-215ENST00000639487 PBX4Q9BYU1 374 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 OSBPL2Q9H1P3 480 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 TTYH1Q9H313 450 aaPredicted RBP6.96□□□□□ -1.3
RTTN-215ENST00000639487 SUDS3Q9H7L9 328 aaPredicted RBP6.96□□□□□ -1.3
RTTN-215ENST00000639487 KCTD5Q9NXV2 234 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 ADAMTS1Q9UHI8 967 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 BARX2Q9UMQ3 279 aaPredicted RBP6.96□□□□□ -1.3
RTTN-215ENST00000639487 PCDHB7Q9Y5E2 793 aa6.96□□□□□ -1.3
RTTN-215ENST00000639487 SLC4A7Q9Y6M7 1214 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms