RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 PCDHB5Q9Y5E4 795 aa19.58■□□□□ 0.72
VCX3A-203ENST00000612369 SNX9Q9Y5X1 595 aa19.58■□□□□ 0.72
VCX3A-203ENST00000612369 CLIC2O15247 247 aa19.57■□□□□ 0.72
VCX3A-203ENST00000612369 KLRC4O43908 158 aa19.57■□□□□ 0.72
VCX3A-203ENST00000612369 FCARP24071 287 aa19.57■□□□□ 0.72
VCX3A-203ENST00000612369 PSMD6Q15008 389 aa19.57■□□□□ 0.72
VCX3A-203ENST00000612369 SLC44A4Q53GD3 710 aa19.57■□□□□ 0.72
VCX3A-203ENST00000612369 GRAMD1CQ8IYS0 662 aa19.57■□□□□ 0.72
VCX3A-203ENST00000612369 OR5B17Q8NGF7 314 aa19.57■□□□□ 0.72
VCX3A-203ENST00000612369 SHKBP1Q8TBC3 707 aa19.57■□□□□ 0.72
VCX3A-203ENST00000612369 TMEM174Q8WUU8 243 aa19.57■□□□□ 0.72
VCX3A-203ENST00000612369 ATOH1Q92858 354 aaPredicted RBP19.57■□□□□ 0.72
VCX3A-203ENST00000612369 SEPT5Q99719 369 aaPredicted RBP19.57■□□□□ 0.72
VCX3A-203ENST00000612369 PLA2G2FQ9BZM2 168 aa19.57■□□□□ 0.72
VCX3A-203ENST00000612369 EXOC1Q9NV70 894 aa19.57■□□□□ 0.72
VCX3A-203ENST00000612369 DDX43Q9NXZ2 648 aaKnown RBP19.57■□□□□ 0.72
VCX3A-203ENST00000612369 SIT1Q9Y3P8 196 aa19.57■□□□□ 0.72
VCX3A-203ENST00000612369 PTPRJQ12913 1337 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 A0A1W2PQ27 194 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 A0A1W2PQ64 194 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 A0A1W2PQD8 194 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 H0Y858 1186 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 HAPLN1P10915 354 aaPredicted RBP19.56■□□□□ 0.72
VCX3A-203ENST00000612369 TNNI1P19237 187 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 SYKP43405 635 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 MRE11P49959 708 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 CYP2J2P51589 502 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 CYP24A1Q07973 514 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 TEAD2Q15562 447 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 MLF2Q15773 248 aaPredicted RBP19.56■□□□□ 0.72
VCX3A-203ENST00000612369 LMBRD2Q68DH5 695 aaPredicted RBP19.56■□□□□ 0.72
VCX3A-203ENST00000612369 ALYREFQ86V81 257 aaKnown RBP19.56■□□□□ 0.72
VCX3A-203ENST00000612369 TTC9BQ8N6N2 239 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 DTWD2Q8NBA8 298 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 RDH13Q8NBN7 331 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 FAM200AQ8TCP9 573 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 DEPDC1BQ8WUY9 529 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 DNASE1L2Q92874 299 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 HPDLQ96IR7 371 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 ZSWIM3Q96MP5 696 aa19.56■□□□□ 0.72
VCX3A-203ENST00000612369 DDX23Q9BUQ8 820 aaKnown RBP19.56■□□□□ 0.72
VCX3A-203ENST00000612369 TRMT61BQ9BVS5 477 aaKnown RBP19.56■□□□□ 0.72
VCX3A-203ENST00000612369 A0A1W2PRU2 124 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 GABRDO14764 452 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 SOAT2O75908 522 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 DLATP10515 647 aaKnown RBP19.55■□□□□ 0.72
VCX3A-203ENST00000612369 GJA1P17302 382 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 PSMC3P17980 439 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 ATF6P18850 670 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 PCSK1P29120 753 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 STK4Q13043 487 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 SNW1Q13573 536 aaKnown RBP19.55■□□□□ 0.72
VCX3A-203ENST00000612369 KMT5BQ4FZB7 885 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 INTS6LQ5JSJ4 861 aaKnown RBP19.55■□□□□ 0.72
VCX3A-203ENST00000612369 TRAPPC11Q7Z392 1133 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 LIMS2Q7Z4I7 341 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 ZSCAN18Q8TBC5 510 aaPredicted RBP19.55■□□□□ 0.72
VCX3A-203ENST00000612369 FAM84AQ96KN4 292 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 CGRRF1Q99675 332 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 OSBPL6Q9BZF3 934 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 SLITRK6Q9H5Y7 841 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 ABCB6Q9NP58 842 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 TRPV5Q9NQA5 729 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 ABI2Q9NYB9 513 aaPredicted RBP19.55■□□□□ 0.72
VCX3A-203ENST00000612369 ZMYM5Q9UJ78 669 aa19.55■□□□□ 0.72
VCX3A-203ENST00000612369 KANSL1LA0AUZ9 987 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 NRG2O14511 850 aaPredicted RBP19.54■□□□□ 0.72
VCX3A-203ENST00000612369 EXOC3O60645 756 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 FAM163BP0C2L3 166 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 GABRR2P28476 465 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 CDC25CP30307 473 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 NDUFA8P51970 172 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 TAF12Q16514 161 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 SOWAHAQ2M3V2 549 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 ARHGAP15Q53QZ3 475 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 SCARA3Q6AZY7 606 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 GAREM2Q75VX8 874 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 MFSD6LQ8IWD5 586 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 ADGRF2Q8IZF7 708 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 KIAA0895Q8NCT3 520 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 PJA1Q8NG27 643 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 IRF7Q92985 503 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 CCDC47Q96A33 483 aaKnown RBP19.54■□□□□ 0.72
VCX3A-203ENST00000612369 NELL2Q99435 816 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 ATXN3LQ9H3M9 355 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 BRD9Q9H8M2 597 aa19.54■□□□□ 0.72
VCX3A-203ENST00000612369 ZNF334Q9HCZ1 680 aaPredicted RBP19.54■□□□□ 0.72
VCX3A-203ENST00000612369 PDXKO00764 312 aa19.53■□□□□ 0.72
VCX3A-203ENST00000612369 KIF20AO95235 890 aa19.53■□□□□ 0.72
VCX3A-203ENST00000612369 WEE1P30291 646 aa19.53■□□□□ 0.72
VCX3A-203ENST00000612369 AP3M2P53677 418 aa19.53■□□□□ 0.72
VCX3A-203ENST00000612369 RPL10AP62906 217 aaKnown RBP19.53■□□□□ 0.72
VCX3A-203ENST00000612369 VITQ6UXI7 678 aa19.53■□□□□ 0.72
VCX3A-203ENST00000612369 SLC9A9Q8IVB4 645 aa19.53■□□□□ 0.72
VCX3A-203ENST00000612369 CCDC127Q96BQ5 260 aa19.53■□□□□ 0.72
VCX3A-203ENST00000612369 FUBP3Q96I24 572 aaKnown RBP eCLIP19.53■□□□□ 0.72
VCX3A-203ENST00000612369 CHAMP1Q96JM3 812 aa19.53■□□□□ 0.72
VCX3A-203ENST00000612369 GCNAQ96QF7 691 aa19.53■□□□□ 0.72
VCX3A-203ENST00000612369 PKMYT1Q99640 499 aa19.53■□□□□ 0.72
VCX3A-203ENST00000612369 LPIN3Q9BQK8 851 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 1564.3 ms