RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 VPS45Q9NRW7 570 aa16.2■□□□□ 0.18
XRCC1-209ENST00000599693 LIMCH1Q9UPQ0 1083 aa16.2■□□□□ 0.18
XRCC1-209ENST00000599693 CACNA1GO43497 2377 aa16.2■□□□□ 0.18
XRCC1-209ENST00000599693 FAM208BQ5VWN6 2430 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 ZNF638Q14966 1978 aaKnown RBP16.19■□□□□ 0.18
XRCC1-209ENST00000599693 OBSL1O75147 1896 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 TRDMT1O14717 391 aaKnown RBP16.19■□□□□ 0.18
XRCC1-209ENST00000599693 OGTO15294 1046 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 KCNK5O95279 499 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 SLC12A3P55017 1021 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 ZRSR1Q15695 479 aaKnown RBP16.19■□□□□ 0.18
XRCC1-209ENST00000599693 TAF12Q16514 161 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 HYIQ5T013 277 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 C9orf57Q5W0N0 161 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 JADE1Q6IE81 842 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 CAMKK1Q8N5S9 505 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 KCTD17Q8N5Z5 321 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 FAM184AQ8NB25 1140 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 PNMA5Q96PV4 448 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 ZCWPW1Q9H0M4 648 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 KCND2Q9NZV8 630 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 LARSQ9P2J5 1176 aaKnown RBP16.19■□□□□ 0.18
XRCC1-209ENST00000599693 DSEQ9UL01 958 aa16.19■□□□□ 0.18
XRCC1-209ENST00000599693 ATG2BQ96BY7 2078 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 SCN1AP35498 2009 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 OTOL1A6NHN0 477 aaPredicted RBP16.18■□□□□ 0.18
XRCC1-209ENST00000599693 HNRNPDLO14979 420 aaKnown RBP16.18■□□□□ 0.18
XRCC1-209ENST00000599693 RNF40O75150 1001 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 EGFP01133 1207 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 PIGRP01833 764 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 DDX6P26196 483 aaKnown RBP eCLIP16.18■□□□□ 0.18
XRCC1-209ENST00000599693 PLK5Q496M5 336 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 RNF43Q68DV7 783 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 TRIM68Q6AZZ1 485 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 CD302Q8IX05 232 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 GIPC2Q8TF65 315 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 C2orf15Q8WU43 125 aaKnown RBP16.18■□□□□ 0.18
XRCC1-209ENST00000599693 HHIPQ96QV1 700 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 EBF3Q9H4W6 596 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 KIF9Q9HAQ2 790 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 CCL26Q9Y258 94 aa16.18■□□□□ 0.18
XRCC1-209ENST00000599693 TCHHQ07283 1943 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 KIAA1549LQ6ZVL6 1849 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 SPEGQ15772 3267 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 NPHP3-ACAD11A0A0J9YXS1 232 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 ANO9A1A5B4 782 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 PIRO00625 290 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 PROS1P07225 676 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 NFICP08651 508 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 PLA2G4BP0C869 781 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 HAPLN1P10915 354 aaPredicted RBP16.17■□□□□ 0.18
XRCC1-209ENST00000599693 DRD1P21728 446 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 AVPR1AP37288 418 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 CDR1P51861 262 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 AMPD2Q01433 879 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 SMARCB1Q12824 385 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 BFSP1Q12934 665 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 TMEM132DQ14C87 1099 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 TCEAL6Q6IPX3 200 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 PSAPL1Q6NUJ1 521 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 TMEM150AQ86TG1 271 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 METTL23Q86XA0 190 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 MAB21L3Q8N8X9 362 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 SPPL2BQ8TCT7 592 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 USP13Q92995 863 aaPredicted RBP16.17■□□□□ 0.18
XRCC1-209ENST00000599693 TCEAL3Q969E4 200 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 FAM212AQ96EL1 285 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 EDEM2Q9BV94 578 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 DUSP15Q9H1R2 295 aaPredicted RBP16.17■□□□□ 0.18
XRCC1-209ENST00000599693 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.17■□□□□ 0.18
XRCC1-209ENST00000599693 POLR3BQ9NW08 1133 aaPredicted RBP16.17■□□□□ 0.18
XRCC1-209ENST00000599693 RALYQ9UKM9 306 aaKnown RBP16.17■□□□□ 0.18
XRCC1-209ENST00000599693 DERAQ9Y315 318 aa16.17■□□□□ 0.18
XRCC1-209ENST00000599693 A0A0B4J269 797 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 ARSAP15289 507 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 SCP2P22307 547 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 NMT1P30419 496 aaKnown RBP16.16■□□□□ 0.18
XRCC1-209ENST00000599693 NLRP12P59046 1061 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 KARSQ15046 597 aaKnown RBP16.16■□□□□ 0.18
XRCC1-209ENST00000599693 ELF2Q15723 593 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 FBXO43Q4G163 708 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 THEM5Q8N1Q8 247 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 RIN3Q8TB24 985 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 PLIN2Q99541 437 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 MSTO1Q9BUK6 570 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 FBRSL1Q9HCM7 1045 aaKnown RBP16.16■□□□□ 0.18
XRCC1-209ENST00000599693 TDP1Q9NUW8 608 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 ABI2Q9NYB9 513 aaPredicted RBP16.16■□□□□ 0.18
XRCC1-209ENST00000599693 CPSF3Q9UKF6 684 aaKnown RBP16.16■□□□□ 0.18
XRCC1-209ENST00000599693 ODF2LQ9ULJ1 636 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 TBX20Q9UMR3 447 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 MYO16Q9Y6X6 1858 aa16.16■□□□□ 0.18
XRCC1-209ENST00000599693 K7ENM7 598 aa16.15■□□□□ 0.18
XRCC1-209ENST00000599693 RHOBTB1O94844 696 aa16.15■□□□□ 0.18
XRCC1-209ENST00000599693 F11P03951 625 aa16.15■□□□□ 0.18
XRCC1-209ENST00000599693 HMGA1P17096 107 aaKnown RBP16.15■□□□□ 0.18
XRCC1-209ENST00000599693 NOVA1P51513 510 aaKnown RBP16.15■□□□□ 0.18
XRCC1-209ENST00000599693 ZNF268Q14587 947 aaPredicted RBP16.15■□□□□ 0.18
XRCC1-209ENST00000599693 PDGFRLQ15198 375 aa16.15■□□□□ 0.18
XRCC1-209ENST00000599693 TMEM119Q4V9L6 283 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms