RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 RARS2Q5T160 578 aaKnown RBP16.48■□□□□ 0.23
IFT20-206ENST00000578122 LIN9Q5TKA1 542 aa16.48■□□□□ 0.23
IFT20-206ENST00000578122 KBTBD7Q8WVZ9 684 aa16.48■□□□□ 0.23
IFT20-206ENST00000578122 ATXN2LQ8WWM7 1075 aaKnown RBP16.48■□□□□ 0.23
IFT20-206ENST00000578122 MRPL45Q9BRJ2 306 aaKnown RBP16.48■□□□□ 0.23
IFT20-206ENST00000578122 S1PR5Q9H228 398 aa16.48■□□□□ 0.23
IFT20-206ENST00000578122 SNX25Q9H3E2 840 aa16.48■□□□□ 0.23
IFT20-206ENST00000578122 SMYD3Q9H7B4 428 aa16.48■□□□□ 0.23
IFT20-206ENST00000578122 SFXN1Q9H9B4 322 aa16.48■□□□□ 0.23
IFT20-206ENST00000578122 APOBEC3GQ9HC16 384 aaKnown RBP16.48■□□□□ 0.23
IFT20-206ENST00000578122 AFF4Q9UHB7 1163 aaKnown RBP16.48■□□□□ 0.23
IFT20-206ENST00000578122 COQ4Q9Y3A0 265 aa16.48■□□□□ 0.23
IFT20-206ENST00000578122 NFE2L3Q9Y4A8 694 aa16.48■□□□□ 0.23
IFT20-206ENST00000578122 SYCE3A1L190 88 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 PMM2O15305 246 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 P4HA2O15460 535 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 LRRN2O75325 713 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 AFPP02771 609 aaKnown RBP16.47■□□□□ 0.23
IFT20-206ENST00000578122 ACAT1P24752 427 aaKnown RBP16.47■□□□□ 0.23
IFT20-206ENST00000578122 PCSK1P29120 753 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 ELF1P32519 619 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 GNL1P36915 607 aaPredicted RBP16.47■□□□□ 0.23
IFT20-206ENST00000578122 TSPY1Q01534 308 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 ADCY1Q08828 1119 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 SMAD4Q13485 552 aaKnown RBP16.47■□□□□ 0.23
IFT20-206ENST00000578122 PUS10Q3MIT2 529 aaKnown RBP16.47■□□□□ 0.23
IFT20-206ENST00000578122 ANO6Q4KMQ2 910 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 WDR44Q5JSH3 913 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 SCARA5Q6ZMJ2 495 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 RNF19BQ6ZMZ0 732 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 CCDC149Q6ZUS6 474 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 DCP1BQ8IZD4 617 aaKnown RBP16.47■□□□□ 0.23
IFT20-206ENST00000578122 SMRP1Q8NCR6 262 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 OR6B3Q8NGW1 331 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.47■□□□□ 0.23
IFT20-206ENST00000578122 PGLYRP2Q96PD5 576 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 ACBD6Q9BR61 282 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 NAT10Q9H0A0 1025 aaKnown RBP16.47■□□□□ 0.23
IFT20-206ENST00000578122 SAMSN1Q9NSI8 373 aaKnown RBP16.47■□□□□ 0.23
IFT20-206ENST00000578122 MAFFQ9ULX9 164 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 BOLA1Q9Y3E2 137 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 C2orf16Q68DN1 1984 aa16.47■□□□□ 0.23
IFT20-206ENST00000578122 TCF20Q9UGU0 1960 aaKnown RBP16.46■□□□□ 0.23
IFT20-206ENST00000578122 GRXCR2A6NFK2 248 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 PRRG1O14668 218 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 HCRTO43612 131 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 RFPL2O75678 378 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 ZMYND10O75800 440 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 SEC24AO95486 1093 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 C8AP07357 584 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 PDGFRBP09619 1106 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 ATF2P15336 505 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 LMO2P25791 158 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 RAP1GAPP47736 663 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 CDH8P55286 799 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 MYL5Q02045 173 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 ITIH3Q06033 890 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 CETN1Q12798 172 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 UVSSAQ2YD98 709 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 SLC39A12Q504Y0 691 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 HSP90AA4PQ58FG1 418 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 PPM1LQ5SGD2 360 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 PTCRAQ6ISU1 281 aaPredicted RBP16.46■□□□□ 0.23
IFT20-206ENST00000578122 CES5AQ6NT32 575 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 LRRTM3Q86VH5 581 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.46■□□□□ 0.23
IFT20-206ENST00000578122 TCEAL8Q8IYN2 117 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 CMASQ8NFW8 434 aaPredicted RBP16.46■□□□□ 0.23
IFT20-206ENST00000578122 SLC7A14Q8TBB6 771 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 FUCA2Q9BTY2 467 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 NIF3L1Q9GZT8 377 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 SDCBP2Q9H190 292 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 ADAM7Q9H2U9 754 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 CYP4F11Q9HBI6 524 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 ZDHHC7Q9NXF8 308 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 CDH9Q9ULB4 789 aa16.46■□□□□ 0.23
IFT20-206ENST00000578122 DOCK6Q96HP0 2047 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 CCDC195A0A1B0GUA6 201 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 MTMR11A4FU01 709 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 KCNJ18B7U540 433 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 MBTPS2O43462 519 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 VNN2O95498 520 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 HNRNPA1P09651 372 aaKnown RBP eCLIP16.45■□□□□ 0.22
IFT20-206ENST00000578122 WEE2P0C1S8 567 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 ASPAP45381 313 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 KCNQ1P51787 676 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 SMARCB1Q12824 385 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 KCNJ12Q14500 433 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 MAN2A1Q16706 1144 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 ZSCAN23Q3MJ62 389 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 INTS6LQ5JSJ4 861 aaKnown RBP16.45■□□□□ 0.22
IFT20-206ENST00000578122 TMC5Q6UXY8 1006 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 RTL10Q7L3V2 364 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 ATAD1Q8NBU5 361 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 TATDN2Q93075 761 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 ASB2Q96Q27 587 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 SYT15Q9BQS2 421 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 BCO2Q9BYV7 579 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 CYP3A43Q9HB55 503 aa16.45■□□□□ 0.22
IFT20-206ENST00000578122 FAM50BQ9Y247 325 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms