RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 CNPP09543 421 aaKnown RBP10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 CTSAP10619 480 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 RPL17P18621 184 aaKnown RBP10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 BRD2P25440 801 aaKnown RBP10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 TKTP29401 623 aaKnown RBP10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 LRPAP1P30533 357 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 NRIP1P48552 1158 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 DLG4P78352 724 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 KRT17Q04695 432 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 TMEM132DQ14C87 1099 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 SNRNP35Q16560 246 aaKnown RBP10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 PTPROQ16827 1216 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 TIGD5Q53EQ6 642 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 ZNF787Q6DD87 383 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 TMC7Q7Z402 723 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 ADSSL1Q8N142 457 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 C1orf127Q8N9H9 656 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 XXYLT1Q8NBI6 393 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 ELMO3Q96BJ8 720 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 COLEC11Q9BWP8 271 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 IGFLR1Q9H665 355 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 ENTPD7Q9NQZ7 604 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 CUEDC1Q9NWM3 386 aaPredicted RBP10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 SIX4Q9UIU6 781 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 CDH22Q9UJ99 828 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 TRAF3IP3Q9Y228 551 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 VWA8A3KMH1 1905 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 CITO14578 2027 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 MYO7AQ13402 2215 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 PIRO00625 290 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 PDXKO00764 312 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 CLASP2O75122 1294 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 TADA2AO75478 443 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 AKAP3O75969 853 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 SMC2O95347 1197 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 NR3C1P04150 777 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 THBS1P07996 1170 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 NPR3P17342 541 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 DSG1Q02413 1049 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 CYP24A1Q07973 514 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 DBN1Q16643 649 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 HIF1AQ16665 826 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 KYAT1Q16773 422 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 DUSP6Q16828 381 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 COBLL1Q53SF7 1204 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 FAM171A1Q5VUB5 890 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 C9orf57Q5W0N0 161 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 ANKRD40Q6AI12 368 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 DCLRE1AQ6PJP8 1040 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 LRRC69Q6ZNQ3 347 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 HS2ST1Q7LGA3 356 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 MICAL1Q8TDZ2 1067 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 TMEM174Q8WUU8 243 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 ATXN2LQ8WWM7 1075 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 CCDC127Q96BQ5 260 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 IFT43Q96FT9 208 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 BORCS6Q96GS4 357 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 HSH2DQ96JZ2 352 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 MFSD14AQ96MC6 490 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 UROC1Q96N76 676 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 GBP4Q96PP9 640 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 DUSP9Q99956 384 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 MTMR12Q9C0I1 747 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 ASB7Q9H672 318 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 SLC38A7Q9NVC3 462 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 CLEC1BQ9P126 229 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 THEGQ9P2T0 379 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 BARX2Q9UMQ3 279 aaPredicted RBP10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 UBQLN1Q9UMX0 589 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 C2CD2Q9Y426 696 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 TSC2P49815 1807 aa10.23□□□□□ -0.77
NPLOC4-219ENST00000576713 PLXNA3P51805 1871 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 ZNF233A6NK53 670 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 LRRIQ3A6PVS8 624 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 H3BQ06 376 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 TEX28O15482 410 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 EXOC3O60645 756 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 IL18RAPO95256 599 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 LDHAP00338 332 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 ITGB3P05106 788 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 EPCAMP16422 314 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 CYP3A5P20815 502 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 FGFR3P22607 806 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 AARSP49588 968 aaKnown RBP eCLIP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 SNRPFP62306 86 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 TFAMQ00059 246 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 POU5F1Q01860 360 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 ADAM15Q13444 863 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 SMC1AQ14683 1233 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 LBRQ14739 615 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 PSMD6Q15008 389 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 EFHC2Q5JST6 749 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 CENPPQ6IPU0 288 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 LLGL2Q6P1M3 1020 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 NLRP8Q86W28 1048 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 GLYCTKQ8IVS8 523 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 CD302Q8IX05 232 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 ZC3H3Q8IXZ2 948 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms