RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 ASAH2Q9NR71 780 aa20.07■□□□□ 0.8
PKD1-223ENST00000561668 DDX43Q9NXZ2 648 aaKnown RBP20.07■□□□□ 0.8
PKD1-223ENST00000561668 GDE1Q9NZC3 331 aa20.07■□□□□ 0.8
PKD1-223ENST00000561668 SIX4Q9UIU6 781 aa20.07■□□□□ 0.8
PKD1-223ENST00000561668 FBXL21Q9UKT6 434 aa20.07■□□□□ 0.8
PKD1-223ENST00000561668 AKAP3O75969 853 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 AP3M2P53677 418 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 PMS1P54277 932 aaKnown RBP20.06■□□□□ 0.8
PKD1-223ENST00000561668 ADAM9Q13443 819 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 TAF12Q16514 161 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 MGAT5BQ3V5L5 792 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 ITIH5Q86UX2 942 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 PDCL2Q8N4E4 241 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 FBXL6Q8N531 539 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 SPATA18Q8TC71 538 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 ING5Q8WYH8 240 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 MCRS1Q96EZ8 462 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 MMS19Q96T76 1030 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 ACBD6Q9BR61 282 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 MFSD1Q9H3U5 465 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 CEP72Q9P209 647 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 DUSP12Q9UNI6 340 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 YIPF1Q9Y548 306 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 ASB3Q9Y575 518 aa20.06■□□□□ 0.8
PKD1-223ENST00000561668 ANHXE9PGG2 379 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 PSMA7O14818 248 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 IKBKBO14920 756 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 MICAL2O94851 1124 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 CLSTN1O94985 981 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 MYL4P12829 197 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 FKBP3Q00688 224 aaKnown RBP20.05■□□□□ 0.8
PKD1-223ENST00000561668 STIM1Q13586 685 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 VEPH1Q14D04 833 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 NFE2Q16621 373 aaPredicted RBP20.05■□□□□ 0.8
PKD1-223ENST00000561668 C1orf220Q5T0J3 134 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 CEP135Q66GS9 1140 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 ANKRD40Q6AI12 368 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 LIMS2Q7Z4I7 341 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 SPPL2BQ8TCT7 592 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 ASIC4Q96FT7 647 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 FAM84AQ96KN4 292 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 SEPT5Q99719 369 aaPredicted RBP20.05■□□□□ 0.8
PKD1-223ENST00000561668 NUP62CLQ9H1M0 184 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 SMOC2Q9H3U7 446 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 L1RE1Q9UN81 338 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 PCDHB5Q9Y5E4 795 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 NUMBLQ9Y6R0 609 aa20.05■□□□□ 0.8
PKD1-223ENST00000561668 STAU1O95793 577 aaKnown RBP20.04■□□□□ 0.8
PKD1-223ENST00000561668 CST3P01034 146 aaPredicted RBP20.04■□□□□ 0.8
PKD1-223ENST00000561668 PCSK1P29120 753 aa20.04■□□□□ 0.8
PKD1-223ENST00000561668 PSMC2P35998 433 aaKnown RBP20.04■□□□□ 0.8
PKD1-223ENST00000561668 BIRC3Q13489 604 aa20.04■□□□□ 0.8
PKD1-223ENST00000561668 HTR4Q13639 388 aa20.04■□□□□ 0.8
PKD1-223ENST00000561668 SCARA3Q6AZY7 606 aa20.04■□□□□ 0.8
PKD1-223ENST00000561668 ISM2Q6H9L7 571 aa20.04■□□□□ 0.8
PKD1-223ENST00000561668 TTI2Q6NXR4 508 aa20.04■□□□□ 0.8
PKD1-223ENST00000561668 NPAS3Q8IXF0 933 aa20.04■□□□□ 0.8
PKD1-223ENST00000561668 ADGRF2Q8IZF7 708 aa20.04■□□□□ 0.8
PKD1-223ENST00000561668 RTP3Q9BQQ7 232 aa20.04■□□□□ 0.8
PKD1-223ENST00000561668 LRRIQ3A6PVS8 624 aaPredicted RBP20.03■□□□□ 0.8
PKD1-223ENST00000561668 VNN2O95498 520 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 FGF19O95750 216 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 MBD3O95983 291 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 C4BPAP04003 597 aaKnown RBP20.03■□□□□ 0.8
PKD1-223ENST00000561668 SRFP11831 508 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 TNNC1P63316 161 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 SLC5A9Q2M3M2 681 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 SOWAHAQ2M3V2 549 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 PARM1Q6UWI2 310 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 INTS8Q75QN2 995 aaKnown RBP20.03■□□□□ 0.8
PKD1-223ENST00000561668 LRRTM3Q86VH5 581 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 HS6ST3Q8IZP7 471 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 SYAP1Q96A49 352 aaPredicted RBP20.03■□□□□ 0.8
PKD1-223ENST00000561668 TSG101Q99816 390 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 DUSP9Q99956 384 aaKnown RBP20.03■□□□□ 0.8
PKD1-223ENST00000561668 GPR88Q9GZN0 384 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 CRISPLD1Q9H336 500 aa20.03■□□□□ 0.8
PKD1-223ENST00000561668 ABI2Q9NYB9 513 aaPredicted RBP20.03■□□□□ 0.8
PKD1-223ENST00000561668 BIN1O00499 593 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 STK25O00506 426 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 CETN3O15182 167 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 SLC16A3O15427 465 aaKnown RBP20.02■□□□□ 0.8
PKD1-223ENST00000561668 CFHP08603 1231 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 RFX1P22670 979 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 ATICP31939 592 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 CDR1P51861 262 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 WDR72Q3MJ13 1102 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 DNAJB7Q7Z6W7 309 aaPredicted RBP20.02■□□□□ 0.8
PKD1-223ENST00000561668 MLKLQ8NB16 471 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 ST13P5Q8NFI4 369 aaPredicted RBP20.02■□□□□ 0.8
PKD1-223ENST00000561668 FGF14Q92915 247 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 PSMG2Q969U7 264 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 SNX25Q9H3E2 840 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 VRTNQ9H8Y1 702 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 WNT16Q9UBV4 365 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 RAPGEFL1Q9UHV5 662 aa20.02■□□□□ 0.8
PKD1-223ENST00000561668 ARIH1Q9Y4X5 557 aaPredicted RBP20.02■□□□□ 0.8
PKD1-223ENST00000561668 TRIM49BA6NDI0 452 aa20.01■□□□□ 0.79
PKD1-223ENST00000561668 NARSO43776 548 aaKnown RBP20.01■□□□□ 0.79
PKD1-223ENST00000561668 FAM163BP0C2L3 166 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms