RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 ARMCX3Q9UH62 379 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-219ENST00000560871 HCN4Q9Y3Q4 1203 aa16.62■□□□□ 0.25
RABGGTA-219ENST00000560871 NME7Q9Y5B8 376 aa16.62■□□□□ 0.25
RABGGTA-219ENST00000560871 HCRTO43612 131 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 TACC1O75410 805 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 SEC24AO95486 1093 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 PIK3CAP42336 1068 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 UVSSAQ2YD98 709 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 WDR72Q3MJ13 1102 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 CBWD6Q4V339 395 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 DCAF17Q5H9S7 520 aaPredicted RBP16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 CBWD3Q5JTY5 395 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 CBWD5Q5RIA9 395 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 CCDC183Q5T5S1 534 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 KRT39Q6A163 491 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 HFE2Q6ZVN8 426 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 TCEAL8Q8IYN2 117 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 THEM5Q8N1Q8 247 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 PLCD3Q8N3E9 789 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 TDRD5Q8NAT2 981 aaKnown RBP16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 ELMO3Q96BJ8 720 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 PKMYT1Q99640 499 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 PRKD2Q9BZL6 878 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 MMRN2Q9H8L6 949 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 DDX43Q9NXZ2 648 aaKnown RBP16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 MAFFQ9ULX9 164 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 POLIQ9UNA4 740 aa16.61■□□□□ 0.25
RABGGTA-219ENST00000560871 TMEM221A6NGB7 291 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 M0R296 226 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 HNRNPA1P09651 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 WARSP23381 471 aaKnown RBP16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 LHX1P48742 406 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 TNNC1P63316 161 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 MYL7Q01449 175 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 ADCY1Q08828 1119 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 SIGLEC14Q08ET2 396 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 SGSM1Q2NKQ1 1148 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 CCDC40Q4G0X9 1142 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 PPM1LQ5SGD2 360 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 TCERG1LQ5VWI1 586 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 CCDC149Q6ZUS6 474 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 LRRTM3Q86VH5 581 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 TRIM59Q8IWR1 403 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 TAF4BQ92750 862 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 PGLYRP2Q96PD5 576 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 ACBD6Q9BR61 282 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 MRPL45Q9BRJ2 306 aaKnown RBP16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 SRRTQ9BXP5 876 aaKnown RBP16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 SMYD3Q9H7B4 428 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 CYP4F11Q9HBI6 524 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 APOBEC3GQ9HC16 384 aaKnown RBP16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 INSL5Q9Y5Q6 135 aa16.6■□□□□ 0.25
RABGGTA-219ENST00000560871 STX10O60499 249 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 LRRN2O75325 713 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 GNA14O95837 355 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 FAM163BP0C2L3 166 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 ACAT1P24752 427 aaKnown RBP16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 ERCC5P28715 1186 aaPredicted RBP16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 CCDC142Q17RM4 750 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 SLC39A12Q504Y0 691 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 ZNF667Q5HYK9 610 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 INTS6LQ5JSJ4 861 aaKnown RBP16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 SPOPLQ6IQ16 392 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 OTOP3Q7RTS5 596 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 TTC9BQ8N6N2 239 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 SMG7Q92540 1137 aaKnown RBP16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 SEMA4DQ92854 862 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 ACSF2Q96CM8 615 aaPredicted RBP16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 MMS19Q96T76 1030 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 SDCBP2Q9H190 292 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 WDR6Q9NNW5 1121 aaKnown RBP16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 TMLHEQ9NVH6 421 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 NXF1Q9UBU9 619 aaKnown RBP16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 LIMD1Q9UGP4 676 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 DACH1Q9UI36 760 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 SORCS3Q9UPU3 1222 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 COQ4Q9Y3A0 265 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 YIPF1Q9Y548 306 aa16.59■□□□□ 0.25
RABGGTA-219ENST00000560871 CCL16O15467 120 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 LMO2P25791 158 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 ELF1P32519 619 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 ASPAP45381 313 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 NOP14P78316 857 aaKnown RBP16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 TSPY1Q01534 308 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 CT47A1Q5JQC4 288 aaPredicted RBP16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 SCARA5Q6ZMJ2 495 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 IRF2BP1Q8IU81 584 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 ATAD1Q8NBU5 361 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 FBXL13Q8NEE6 735 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 ASIC4Q96FT7 647 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 SYT15Q9BQS2 421 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 PI4K2AQ9BTU6 479 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 HSFX1Q9UBD0 423 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 KMT2EQ8IZD2 1858 aa16.58■□□□□ 0.24
RABGGTA-219ENST00000560871 CLUHO75153 1309 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 PRRG1O14668 218 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 PMM2O15305 246 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 FGFR1OPO95684 399 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 PCSK1P29120 753 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 RAP1GAPP47736 663 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms